Chlorophyll, side chain

Very recently it was demonstrated that tocopherol moieties in kerogen are likely precursors of prist-l-ene (Figure 7) (30). This idea was supported by the fact that tocopherols are widely distributed in photosynthetic tissues and that they also occur as such in several recent sediments (31). It is tempting to conclude that during "natural pyrolysis" the generated pristene will be transformed to the well known component, pristane, in ancient sediments and oils. This example nicely illustrates that we have to be very careful when we conclude that acyclic isoprenoid hydrocarbons such as pristane originate from the chlorophyll side chain, phytol, based solely on structural similarities. 

Microbial degradation of isoprenoids in the rumen of ruminants, for example of the chlorophyll side chain formed by (2 ,3,7i ,lli ,15)-3,7,ll,15-tetramethylhexadec-2-en-l-ol (phytol), yields some more branched acids, such as (2RS,6R,10R)-tetramethylpentadecanoic (pristanic) or (3i S,7R,llR,15)-3,7,ll,... 

Green coloration, present in many vegetable oils, poses a particular problem in oil extracted from immature or damaged soybeans. Chlorophyll is the compound responsible for this defect. StmcturaHy, chlorophyll is composed of a porphyrin ring system, in which magnesium is the central metal atom, and a phytol side chain which imparts a hydrophobic character to the stmcture. Conventional bleaching clays are not as effective for removal of chlorophylls as for red pigments, and specialized acid-activated adsorbents or carbon are required. 

The transformation of the porphyrin intermediate 4 into a chlorin can be achieved after introduction of a C — C double bond into the 15-propanoate side chain of 4 to yield 5. The cyclization of 5 with participation of the 15-acrylic ester side chain under acidic conditions gives the chlorin 6 which is then transformed in a multistep reaction sequence into chlorophyll a. The driving force of chlorin formation from the porphyrin is believed to be the relief of steric strain at the sterically overcrowded porphyrin periphery which gives the desired trans arrangement of the propanoate side chain and the methyl group in the reduced ring. The total... 

Esterification increases the lipophilic character of the pigments that has been recogiuzed as an important factor for interactions with the peptide chains of proteins. The hydrolysis of this side chain results in chlorophyllides and the concomitant removal of the Mg + ion in pheophorbides. Only a Umited number of natural chlorophylls in plants and photosynthetic organisms has been described and is well... 

Esterification of the propionic acid side chain at C-13 (ring C) with a methyl group catalyzed by S-adenosyl-L-methionine-magnesium protoporphyrin 0-meth-yltransferase yields protoporphyrin IX monomethyl ester (MPE), which originates protochlorophyllide by a P-oxidation and cyclization of the methylated propionic side chain. This molecule contains a fifth isocyclic ring (ring E), the cyclopentanone ring that characterizes aU chlorophylls. 

In accordance with the structure of chlorophyll c, it is hypothesized that its biosynthesis comes from protochlorophyllide a by dehydrogenation of the side chain at C-17. Chlorophyll d should arise from chlorophyll a by oxidation of the C-3-vinyl residue, but at which stage of chlorophyll biosynthesis this occurs is unknown. The biosynthesis of bacteriochlorophylls seems to follow the same general pathway of higher plants, according to studies performed with chlorophylhde and bacterio-chlorophyU enzymes. ... 

In plant plastids, GGPP is formed from products of glycolysis and is eight enzymatic steps away from central glucose metabolism. The MEP pathway (reviewed in recent literature - ) operates in plastids in plants and is a preferred source (non-mevalonate) of phosphate-activated prenyl units (IPPs) for plastid iso-prenoid accumulation, such as the phytol tail of chlorophyll, the backbones of carotenoids, and the cores of monoterpenes such as menthol, hnalool, and iridoids, diterpenes such as taxadiene, and the side chains of bioactive prenylated terpenophe-nolics such as humulone, lupulone, and xanthohumol. The mevalonic pathway to IPP that operates in the cytoplasm is the source of the carbon chains in isoprenes such as the polyisoprene, rubber, and the sesquiterpenes such as caryophyllene. 

It should be noted that in many algae, chlorophyll b is replaced by chlorophyll c where the phytyl ester is replaced by a methyl ester and the side chain carrying the function is unsaturated. In a similar manner, photosynthetic bacteria contain the closely related bacteriochlorophylls rather than the normal chlorophylls [29]. 

The isoprenoid hycrocarbons pristane and phytane (derived from the phytol side chain of chlorophyll), as well as porphyrins, have been detected in organic extracts of the Nonesuch Shale of 1.1 billion year age [23]. Their presence points to the existence of photosynthetic pigments in the Precambrian era, but it is also possible that these extractable substances could have been contributed to the rock at a later time. However, in this instance contamination appears to be less likely on account of the large abundance of organic material in this shale. 

The biosynthesis of monoterpenes, the major components of peppermint essential oils, can be divided into four stages (Fig. 9.4). Stage 1 includes the formation of isopentenyl diphosphate (IPP) and dimethylallyl alcohol (DMAPP). In plants, two separate pathways are utilized for the synthesis of these universal C5 intermediates, with the cytosolic mevalonate pathway being responsible for the formation of sterols and certain sesquiterpenes, and the plastidial mevalonate-independent pathway being involved in the biosynthesis of isoprene, monoterpenes, certain sesquiterpenes, diterpenes, tetraterpenes, as well as the side chains of chlorophyll and plastoquinone.16 In peppermint oil gland secretory cells, however, the mevalonate pathway is blocked and the biosynthesis of monoterpenoid essential... 

SCHWENDER, J., SEEMANN, M LICHTENTHALER, H.K., ROHMER, M., Biosynthesis of isoprenoids (carotenoids, sterols, prenyl side-chains of chlorophylls and plastoquinone) via a novel pyruvate/glyceraldehyde 3-phosphate non-mevalonate pathway in the green alga Scenedesmus obliquus, Biochem. J., 1996, 316, 73-80. 

Figure 10.15 The chlorophyll a and b molecules have vinyl, ethyl and phytyl side chains as R, R3 and R4, respectively chlorophyll a has a methyl group as R2, which is replaced by a formyl group in chlorophyll b. (From Voet and Voet, 2004. Reproduced with permission from John Wiley Sons., Inc.)...

Phytene is an example of a diterpene. It is found as the phytyl side chain in chlorophyll a and vitamin K. Haslene is an example of a sesterpene. It is an imsaturated and branched simple lipid synthesized by marine pennate diatoms. One of the largest femilies of terpenes... 

Examples of terpenes (a) isoprene, (b) phytene, which is a side chain of chlorophyll a, (c) squalene, (d) vitamin A, (e) haslene, (f) amyrin, and (g) cephalosporin. 

One of the simplest and most significant of the diterpenes is phytol, a reduced form of geranylgeraniol, which constitutes the lipophilic side-chain of the chlorophylls. Phytol also forms a part of vitamin E (tocopherols) and K molecules. Vitamin A is also a 20-carbon-containing compound, and can be regarded as a diterpene. However, vitamin A is formed from a cleavage of a tetraterpene. Among the medicinally important diterpenes, paclitaxel, isolated from Taxus brevifolia (family Taxaceae), is one of the most successful anticancer drugs of modern time. 

Metal ion chelates of various porphyrins, differing in their substituents at positions 1-8, are intimately involved in a great number of life processes. Iron protoporphyrin (13) is the most common form and serves as the cofactor of a large number of enzymes. Usually (13) is non-covalently bound to its conjugate apoenzymes. Examples of covalently attached (13) are provided by c-type cytochromes, the attachment being between two vinyl side chains of (13) and two cysteine residues of the protein. Other biologically important derivatives of porphyrin include chlorophyll a (14), bacteriochlorophyll a and heme a (B-79MI11002). 

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