Alcohol dehydrogenase coenzyme

RNS, ribonuclease LZM, lysozyme SNS, staphylococcal nuclease LZ4, T4 lysozyme PAP, papain TLS, thermolysin, TRX, thioiedoxin FLN, flavodoxin ADH, alcohol dehydrogenase coenzyme domain AKN, adenyl kinase MDG, malate dehydrogenase TIM, triosephosphate isomerase SUB, subtilisin CPA, carboxypeptidase LDH, lactate dehydrogenase PGK, phosphoglycerate kinase GPD, glyceraldehyde 3-phosphate dehydrogenase, HKN, hexokinase. 

The reduction of ( )-2-, ( )-3- and ( )-4-cinnamoylpyridines by 1,4-dihydropyridines to give dihydro ketones has also been shown to be catalyzed by zinc(II) and magnesium(II).527 Kinetic measurements show that the rate of reduction is fastest in the case of the 2-isomer where the metal is simultaneously complexed with the nitrogen and oxygen donors. A very fast zinc-catalyzed reduction of pyridine-2-carbaldehyde by the alcohol dehydrogenase coenzyme model JV,JV -diethyl-N-benzyl-l,4-dihydronicotinamide (170) has also been described.528... 

Alcohol dehydrogenases (Coenzyme) Lactobacillus kefir (NADP) Mucor javanicus (NAD) yeast (NAD) not known... 

Figure 1.9 Examples of functionally important intrinsic metal atoms in proteins, (a) The di-iron center of the enzyme ribonucleotide reductase. Two iron atoms form a redox center that produces a free radical in a nearby tyrosine side chain. The iron atoms are bridged by a glutamic acid residue and a negatively charged oxygen atom called a p-oxo bridge. The coordination of the iron atoms is completed by histidine, aspartic acid, and glutamic acid side chains as well as water molecules, (b) The catalytically active zinc atom in the enzyme alcohol dehydrogenase. The zinc atom is coordinated to the protein by one histidine and two cysteine side chains. During catalysis zinc binds an alcohol molecule in a suitable position for hydride transfer to the coenzyme moiety, a nicotinamide, [(a) Adapted from P. Nordlund et al., Nature 345 593-598, 1990.)...

As another example, studies with deuterium-labeled substrates have shown that the reaction of ethanol with the coenzyme NAD+ catalyzed by yeast alcohol dehydrogenase occurs with exclusive removal of the pro-R hydrogen from ethanol and with addition only to the Re face of NAD+. 

Alcohols such as ethanol, 2-propanol, and so on, have been widely used to recycle the coenzyme for the reduction catalyzed by alcohol dehydrogenase since the enzyme catalyzes both reduction and oxidation. Usually, an excess amount of the hydrogen source is used to push the equilibrium toward formation of product alcohols. 

Figure 8.27 Reduction of aldehyde in SCCO2 by an isolated enzyme, horse liver alcohol dehydrogenase (HLADH) [20c] (a) Reaction scheme (b) fluorinated coenzyme soluble in CO2 and (c) effect of coenzyme on the reaction.

Fig. 29. Decrease in intensity of nitroxide ESR signal npon addition of deuterated ethanolamine to ethanolamine ammonia lyase containing spin labeled cobinamide coenzyme. The two curves are for different concentrations of coenzyme to enzyme. The arrows indicate the point at which alcohol dehydrogenase and NADH was added to remove acetaldehyde from the enzyme. Note that full intensity is regained...

Stone CL, Bosron WF, Dunn MF. Amino acid substitutions at position 47 of human beta 1 beta 1 and beta 2 beta 2 alcohol dehydrogenases affect hydride transfer and coenzyme dissociation rate constants. J Biol Chem 1993 268 892-899... 

When enzymes like alcohol dehydrogenase, are chiral, reduce carbonyl groups using coenzyme NADH, they discriminate between the two faces of the trigonal planar carbonyl substrate, such that a predominance of one of the two possible stereoisomeric forms of the tetrahedral product results, i) If the original reactant was chiral, the formation of the new stereocenter may result in preferential formation of one diastereomer of the product => a diastereoselectiv reaction. 

The way in which thiamine participated in the oxidation of pyruvate became clearer when Lohmann and Schuster (1937) showed vitamin Bj to be present intracellularly as thiamine pyrophosphate. In yeast, decarboxylation of pyruvate yielded ethanal which was reduced by alcohol dehydrogenase to give ethanol. A cofactor was needed for this decarboxylation, co-carboxylase. Like the cofactor needed in animal cells for the decarboxylation of pyruvate, cocarboxylase was found to be identical to thiamine pyrophosphate. Vitamin Bj thus became the first vitamin whose intracellular function as a coenzyme had been established in vitro. Another aphorism therefore arose about vitamins—B vitamins are (parts of) coenzymes—an idea that was to be completely confirmed. 

S. Subramanian, J. B. A. Ross, L. Brand, and P. D. Ross, Investigation of the nature of enzyme-coenzyme interactions in binary and ternary complexes of liver alcohol dehydrogenase with coenzymes, coenzyme analogs, and substrate analogs by ultraviolet absorption and phosphorescence spectroscopy, Biochemistry 20, 4086-4093 (1981). 

K. F. Gu and T. M. S. Chang, Conversion of ammonia or urea into essential amino acids, using artificial cells containing an immobilized multienzyme system and dextran-NAD+ 2. Yeast alcohol dehydrogenase for coenzyme recycling, Biotechnol. Appl. Biochem., 12, 227-236 (1990). 

Figure 6.1 Pathways involved in glucose oxidation by plant cells (a) glycolysis, (b) Krebs cycle, (c) mitochondrial cytochrome chain. Under anoxic conditions. Reactions 1, 2 and 3 of glycolysis are catalysed by lactate dehydrogenase, pyruvate decarboxylase and alcohol dehydrogenase, respectively. ATP and ADP, adenosine tri- and diphosphate NAD and NADHa, oxidized and reduced forms of nicotinamide adenine dinucleotide PGA, phosphoglyceraldehyde PEP, phosphoenolpyruvate Acetyl-CoA, acetyl coenzyme A FP, flavoprotein cyt, cytochrome e, electron. (Modified from Fitter and Hay, 2002). Reprinted with permission from Elsevier...

This zinc metalloenzyme [EC 1.1.1.1 and EC 1.1.1.2] catalyzes the reversible oxidation of a broad spectrum of alcohol substrates and reduction of aldehyde substrates, usually with NAD+ as a coenzyme. The yeast and horse liver enzymes are probably the most extensively characterized oxidoreductases with respect to the reaction mechanism. Only one of two zinc ions is catalytically important, and the general mechanistic properties of the yeast and liver enzymes are similar, but not identical. Alcohol dehydrogenase can be regarded as a model enzyme system for the exploration of hydrogen kinetic isotope effects. 

Salisbury, S.A., Forrest, H.S., Cruse, W.B.T., and Kennard, O., A novel coenzyme from bacterial primary alcohol dehydrogenases, Nature, (London), 280, 843, 1979. 

In the first step, pyruvate is decarboxylated in an irreversible reaction catalyzed by pyruvate decarboxylase. This reaction is a simple decarboxylation and does not involve the net oxidation of pyruvate. Pyruvate decarboxylase requires Mg24" and has a tightly bound coenzyme, thiamine pyrophosphate, discussed below. In the second step, acetaldehyde is reduced to ethanol through the action of alcohol dehydrogenase, with... 

When ethanol is oxidized by the action of alcohol dehydrogenase (Eq. 9-73), only the pro-R hydrogen atom is removed. If the reaction is reversed in such a way that deuterium is introduced into ethanol from the reduced coenzyme the optically active R-2-deuterio-ethanol is formed. The ability of an enzyme to... 

A crystal structure of a ternary complex of horse liver alcohol dehydrogenase with NADH and the inhibitor, dimethyl sulfoxide, first at 4.5 A resolution1365 and a further refinement to 2.9 A resolution,1366 has been published by Eklund et al. The gross structure of the ternary complex is similar to that of the free enzyme structure. Each subunit is divided into a coenzyme-binding domain and a catalytic domain. The subunits are joined together near the... 

The alcohol dehydrogenases are zinc metalloenzymes of broad specificity. They oxidize a wide range of aliphatic and aromatic alcohols to their corresponding aldehydes and ketones, using NAD+ as a coenzyme (see equation 16.1). The two most studied enzymes are those from yeast and horse liver. The crystal structures... 

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