Adenosine triphosphate , enzyme reactions

FIGURE 16 7 Nucleophilic substitution at the primary carbon of adenosine triphosphate (ATP) by the sulfur atom of methionine yields S adenosylmethionme (SAM) The reaction is catalyzed by an enzyme... 

Magnesium is the second most abundant intracellular cation. Magnesium serves as an essential cofactor for numerous enzymes and in many biochemical reactions, including reactions involving adenosine triphosphate (ATP).17 Magnesium disorders can be multifactorial and can be related to renal function, disease... 

In the processes that require regeneration of cofactors such as nicotinamide adenine dinucleotide phosphate (NAD(P)H) and adenosine triphosphate (ATP), whole-cell biotransformations are more advantageous than enzymatic systems [12,15]. Whole cells also have a competitive edge over the isolated enzymes in complex conversions involving multiple enzymatic reactions [14]. 

Adenosine triphosphate (ATP) is one of the most important cofactors involved in many of the synthetic reactions going on within the cell. Its recent large scale in vitro enzymatic synthesis from adenosine and acetylphosphate is of particular interest. Three enzymes immobilized in polyacrylamide gel were used adenosine kinase, adenylate kinase and acetate kinase (lip. ... 

Another enzyme used for the measurement of glucose is hexokinase (EC 2.7.1.1) which catalyses the phosphorylation of glucose to produce glucose-6-phosphate with adenosine triphosphate as the phosphate donor and magnesium ions as an activator. The rate of formation of glucose-6-phosphate can be linked to the reduction of NADP by the enzyme glucose-6-phosphate dehydrogenase (EC 1.1.1.49). This indicator reaction can be monitored spectrophotometrically at 340 nm or fluorimetrically ... 

In some cases, enzymes require the assistance of coenzymes (cofactors) to ensure the reactions proceed. Coenzymes include vitamins, metal ions, acids, and bases. They can act as transporters or electron acceptors or be involved in oxidation-reduction reactions. At the completion of the reaction, coenzymes are released, and they do not form part of the products. For some reactions that are energetically unfavorable, an energy source provided by the compound adenosine triphosphate (ATP) is needed to ensure the reactions proceed, as shown in the following reactions ... 

For most amino acids, the ester linkage between the ct-COOH group of the amino acid and the 3 -terminal adenosine of a cognate tRNA is formed in a two-step mechanism catalyzed by an aminoacyl-tRNA synthetase (aaRS). ° In this so-called direct pathway, the aaRS first catalyzes the reaction of the amino acid with adenosine triphosphate (ATP), yielding the enzyme-bound high-energy intermediate aa AMP and PPi in the second step, this aaRS-bound intermediate reacts with tRNA to yield aa-tRNA and AMP (Figure 1). 

Similarly, specific catalysts called enzymes are important factors in determining what reactions occur at an appreciable rate in biological systems. For example, adenosine triphosphate is thermodynamically unstable in aqueous solution with respect to hydrolysis to adenosine diphosphate and inorganic phosphate. Yet this reaction proceeds very slowly in the absence of the specific enzyme adenosine triphosphatase. This combination of thermodynamic control of direction and enzyme control of rate makes possible the finely balanced system that is a hving cell. 

The cytochrome b(6)f complex mediates electron transfer between the PSI and PSII reaction centers by oxidizing hpophUic plastoquinol (PQH2) (see Figure 7.24) and reducing the enzymes plastocyanin or cytochrome Ce. The electronic connection also generates a transmembrane electrochemical proton gradient that can support adenosine triphosphate (ATP) synthesis instead of electron transport. 

In the preceding sections the conversion of purines and purine nucleosides to purine nucleoside monophosphates has been discussed. The monophosphates of adenosine and guanosine must be converted to their di- and triphosphates for polymerization to RNA, for reduction to 2 -deoxyribonucleoside diphosphates, and for the many other reactions in which they take part. Adenosine triphosphate is produced by oxidative phosphorylation and by transfer of phosphate from 1,3-diphosphoglycerate and phosphopyruvate to adenosine diphosphate. A series of transphosphorylations distributes phosphate from adenosine triphosphate to all of the other nucleotides. Two classes of enzymes, termed nucleoside mono-phosphokinases and nucleoside diphosphokinases, catalyse the formation of the nucleoside di- and triphosphates by the transfer of the terminal phosphoryl group from adenosine triphosphate. Muscle adenylate kinase (myokinase)... 

The first step of this sequence, which is not unique to de novo purine nucleotide biosynthesis, is the synthesis of 5-phosphoribosylpyrophosphate (PRPP) from ribose-5-phosphate and adenosine triphosphate. Phosphoribosyl-pyrophosphate synthetase, the enzyme that catalyses this reaction [278], is under feedback control by adenosine triphosphate [279]. Cordycepin interferes with thede novo pathway [229, 280, 281), and cordycepin triphosphate inhibits the synthesis of PRPP in extracts from Ehrlich ascites tumour cells [282]. Formycin [283], probably as the triphosphate, 9-0-D-xylofuranosyladenine [157] triphosphate, and decoyinine (LXXlll) [284-286] (p. 89) also inhibit the synthesis of PRPP in tumour cells, and this is held to be the blockade most important to their cytotoxic action. It has been suggested but not established that tubercidin (triphosphate) may also be an inhibitor of this reaction [193]. 

The activation of adenylyl cyclase enables it to catalyze the conversion of adenosine triphosphate (ATP) to 3 5 -cyclic adenosine monophosphate (cAMP), which in turn can activate a number of enzymes known as kinases. Each kinase phosphorylates a specific protein or proteins. Such phosphorylation reactions are known to be involved in the opening of some calcium channels as well as in the activation of other enzymes. In this system, the receptor is in the membrane with its binding site on the outer surface. The G protein is totally within the membrane while the adenylyl cyclase is within the membrane but projects into the interior of the cell. The cAMP is generated within the cell (see Rgure 10.4). 

Phosphorylation and dephosphorylation Phosphorylation reactions are catalyzed by a family of enzymes called protein kinases that use adenosine triphosphate (ATP) as a phosphate donor. Phosphate groups are cleaved from phosphorylated enzymes by the action of phosphoprotein phosphatases (Figure 5.18). 

Kinetic studies of the nucleotide analogs, y-phenylpropyl di- and triphosphate, have been undertaken to define the role of the adenosine residue in the chemical and enzymic reactions of adenosine triphosphate. A catalytic function associated with binding of metal ions at the adenine nitrogens has been ascribed to the adenosine moiety in phosphate transfer reactions in which adenosine di- or triphosphates function as the phosphate source109-"2. The pH-rate profile (Fig. 6) for the hydrolysis of -y-phenylpropyl diphosphate... 

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