Size exclusion chromatography buffers

For the size exclusion chromatography of proteins on silica-hased diol packings, it is generally recommended to use fully aqueous mobile phases with a salt concentration between 0.1 and 0.3 M. In general, a phosphate buffer around pH 7 is used as the mobile phase. Under these circumstances, the tertiary structure of most proteins is preserved without difficulty and the interaction of proteins with each other is minimized. However, other inorganic buffers or combinations of buffers with organic solvents can be used without difficulties for special applications. 

Figure 3 Reversed-phase chromatography of products after alkaline hydrolysis of /3-poly(L-malate), Discrete polymer products are formed, which differ in length by several units of L-malate. The absorbance at 220-nm wavelength was measured, (a) /3-Poly(L-malate) before hydrolysis, (b) After 10-min incubation in 20 mM NaOH at 37°C. (c) After 15 h in 20 mM NaOH at 37°C. (d) After I h in 500 mM NaOH at 100°C. High pressure chromatography (HPLC) on Waters reversed-phase Ci8- i-Bondapak. The methanol gradient (in water-trifluoro acetic acid, pH 3.0) was programmed as follows 0-40 min 0.3-23%, 40-47 min 23-40%, 47-49 min 40%, 49-54 min 40-0%. (d) Inset size exclusion chromatography after 3-min alkaline hydrolysis at pH 10.2. BioSil SEC 250 column of 300 mm x 7.8 mm size, 0.2 M potassium phosphate buffer pH 7.0.

In 1971, Hiatt et al. found that polyethylene oxide (PEO) of molecular weight about 100000 prevented the adsorption of rabies virus to porous glass with an average pore diameter of 1250 A. The support was modified by passage of one void volume of 0.4% solution of the polymer in water, followed by 5 or more volumes of distilled water or buffered salt solution. The virus was effectively purified from the admixtures of brain tissue fluid by means of size-exclusion chromatography on the modified glass column [28]. 

Chemically attached copolymers of iV-vinylpyrrolidone (N-VP) and N-(2-hydroxyethyl)acrylamide (N-HEAA) steeply decrease the inherent glass adsorp-tivity which is observed for proteins in aqueous buffer solutions. Thus, it became possible to apply the prepared materials to the size exclusion chromatography of viruses and ribosomes. 

Detection in 2DLC is the same as encountered in one-dimensional HPLC. A variety of detectors are presented in Table 5.2. The choice of detector is dependent on the molecule being detected, the problem being solved, and the separation mode used for the second dimension. If MS detection is utilized, then volatile buffers are typically used in the second-dimension separation. Ultraviolet detection is used for peptides, proteins, and any molecules that contain an appropriate chromophore. Evaporative light scattering detection has become popular for the analysis of polymers and surfactants that do not contain UV chromophores. Refractive index (RI) detection is generally used with size exclusion chromatography for the analysis of polymers. 

Purify the derivatized dendrimer using gel filtration (size exclusion chromatography) on a desalting column or through use of ultrafiltration spin-tubes (for G-4 and above). For smaller dendrimers, the derivatives may be purified by repeated precipitation from a meth-anolic solution by addition of ethyl acetate, dioxane, or benzene. The SPDP-dendrimer may be dried by lyophilization (if in water or buffer) or by solvent evaporation in vacuo (if the precipitation method was used). 

Analytical size exclusion chromatography was performed on an Akta Purifier (Pharmacia) using a 24-ml Superose 6 HR 10/30 column (Pharmacia). 250-pl samples in AP-buffer (20mM Tris buffer, pH 8.0, 100 mM NaCl), with or without 0.1 % P-DM, were injected onto the column equilibrated with the same buffer and eluted at a flow rate of 0.3 ml min 1. Elution profiles were recorded at 220, 280 and 674 nm. 

Three gradients of 0.0-0.5 M sodium chloride were run consecutively at 4°C in 0.05 M sodium acetate-acetic acid, 1 mM sodium azide, pH 5.25, followed by 0.05 M sodium acetate-acetic acid, 1 mM sodium azide, pH 3.5, and finally by 0.05 M sodium dihydrogen phosphate-disodium hydrogen phosphate (approx. 1 3), 1 mM sodium azide, pH 7.0. After sample application, the column was washed with the starting buffer to remove any non-bound compounds. Elution was continued with the high salt buffer. Fractions of 4 ml were collected and assayed for reactivity towards ninhydrin and for electric conductivity (salt concentration) after 75-fold dilution of a 100-pl aliquot. Ninhydrin-positive fractions were pooled for each peak, concentrated, and desalted by size exclusion chromatography (see above). 

If the sample is of the purity required, only buffer exchange is needed to give the final product. If further purification is required, a size exclusion chromatography step (SEC) is usually carried out. This step both removes contaminants from the sample, tyqjicaUy giving protein products of >90% purity, and gives information regarding the... 

Fractionation of proteins according to size utilizing cross-linked dextran or polyacrylamide gel columns was first demonstrated by Porath and Flodin 63 in 1959. This technique has become the most widely accepted method for separation and molecular weight determination of hydrophilic and some hydrophobic macromolecules using aqueous buffers with or without organic modifier. While this technique might not be unique in its ability to resolve and separate proteins, it is one additional simple and effective tool in the chemist s armamentarium. The theories behind size-exclusion HPLC and size-exclusion chromatography at low pressure are identical and are described in several publications. 31 34 36 39 44 64 65 ... 

Although dated, the following example illustrates the fact that size-exclusion chromatography can be conducted efficiently and reliably under high pressure using a less conventional solvent system (TEAP) than the acetate-, phosphate-, and borate-based buffers described in the manufacturers catalogues 66 ... 

Remove salt while exchanging the reaction mixture with an appropriate buffer system by dialysis or size-exclusion chromatography. 

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