Redox proteins electron transport

Mode of action Metronidazole is selectively toxic not only for amebae but also for anaerobic organisms (including bacteria), and for anoxic or hypoxic cells. Some anaerobic protozoan parasites (including amebae) possess ferrodoxin-like, low-redox potential, electron transport proteins that participate in metabolic electron removal reactions. The nitro group of metronidazole is able to serve as an electron acceptor, forming reduced cytotoxic compounds that bind to proteins and DIMA to result in cell death. 

Most known multiheme cytochromes and enzymes belong to the family of cytochromes c (see Iron Heme Proteins Electron Transport), which contain Fe-protoporphyrin IX covalently attached to the polypeptide chain by two thioether bonds, formed by addition of two cysteinyl residues to the vinyl side-chains of the porphyrin ring. The two cysteines form a characteristic amino acid sequence motif CXXCH, usually indicative of heme c ligation, and where the histidine is the axial fifth ligand to the iron. For some cytochromes (see Section 2), the number of residues between the two cysteines can be three or four. The heme redox potentials in cytochromes c cover a wide range and are tuned by several factors, usually dominated by the type of axial ligation and the extent of solvent exposure of the heme. ... 

In the third complex of the electron transport chain, reduced coenzyme Q (UQHg) passes its electrons to cytochrome c via a unique redox pathway known as the Q cycle. UQ cytochrome c reductase (UQ-cyt c reductase), as this complex is known, involves three different cytochromes and an Fe-S protein. In the cytochromes of these and similar complexes, the iron atom at the center of the porphyrin ring cycles between the reduced Fe (ferrous) and oxidized Fe (ferric) states. 

These results may be viewed in the wider context of interactions between potential ligands of multifunctional xenobiotics and metal cations in aquatic environments and the subtle effects of the oxidation level of cations such as Fe. The Fe status of a bacterial culture has an important influence on synthesis of the redox systems of the cell since many of the electron transport proteins contain Fe. This is not generally evaluated systematically, although the degradation of tetrachloromethane by a strain of Pseudomonas sp. under denitrifying conditions clearly illustrated the adverse effect of Fe on the biotransformation of the substrate (Lewis and Crawford 1993 Tatara et al. 1993). This possibility should therefore be taken into account in the application of such organisms to bioremediation programs. 

P. Mitchell (Nobel Prize for Chemistry, 1978) explained these facts by his chemiosmotic theory. This theory is based on the ordering of successive oxidation processes into reaction sequences called loops. Each loop consists of two basic processes, one of which is oriented in the direction away from the matrix surface of the internal membrane into the intracristal space and connected with the transfer of electrons together with protons. The second process is oriented in the opposite direction and is connected with the transfer of electrons alone. Figure 6.27 depicts the first Mitchell loop, whose first step involves reduction of NAD+ (the oxidized form of nicotinamide adenosine dinucleotide) by the carbonaceous substrate, SH2. In this process, two electrons and two protons are transferred from the matrix space. The protons are accumulated in the intracristal space, while electrons are transferred in the opposite direction by the reduction of the oxidized form of the Fe-S protein. This reduces a further component of the electron transport chain on the matrix side of the membrane and the process is repeated. The final process is the reduction of molecular oxygen with the reduced form of cytochrome oxidase. It would appear that this reaction sequence includes not only loops but also a proton pump, i.e. an enzymatic system that can employ the energy of the redox step in the electron transfer chain for translocation of protons from the matrix space into the intracristal space. 

Fe-S complexes have important functions in today s living systems, in enzymes such as the ferredoxins and oxidoreductases, as well as in electron transport proteins. It is striking that these redox reactions mainly involve elements and compounds such as CO, H2 and N2, which were probably also components of the primeval Earth s atmosphere. Thus, the assumption of an active involvement of Fe-S clusters in a (hypothetical) Fe-S world in processes which finally led to biogenesis appears completely reasonable We now have a background to the theory of the chemoau-totrophic origin of life . 

Most mechanisms which control biological functions, such as cell respiration and photosynthesis (already discussed in Chapter 5, Section 3.1), are based on redox processes. In particular, as shown again in Figure 1, it is evident that, based on their physiological redox potentials, in photosynthesis a chain of electron carriers (e.g. iron-sulfur proteins, cytochromes and blue copper proteins) provides a means of electron transport which is triggered by the absorption of light. 

Chapter 7 has reported on the importance of iron in biological species. Because iron is the most abundant transition metal found in biological species, one would expect a wide variety of iron-containing proteins and metalloenzymes. Only a few of these have been treated in any detail in this chapter. Little or no mention has been made of how or why iron ions evolved to be the most biologically abundant transition metal ions probably their usefulness in redox situations and for electron transport has something to do with their popularity. Iron homeostasis in biological species has not been discussed, although this... 

Ubiquinone is readily reduced to ubiquinol, a process requiring two protons and two electrons similarly, ubiquinol is readily oxidized back to ubiquinone. This redox process is important in oxidative phosphorylation, in that it links hydrogen transfer to electron transfer. The cytochromes are haem-containing proteins (see Box 11.4). As we have seen, haem is an iron-porphyrin complex. Alternate oxidation-reduction of the iron between Fe + (reduced form) and Fe + (oxidized form) in the various cytochromes is responsible for the latter part of the electron transport chain. The individual cytochromes vary structurally, and their classification... 

Iron-sulfur proteins belong to the class of electron-transport proteins [29]. They contain an iron sulfur cluster, e.g. [4Fe-4S], which shuttles between different oxidation states. The structure of the cluster is quite consistent among a series of these proteins, but their redox potentials vary widely. Synthetic models of iron-sulfur proteins have been designed [30] to investigate the factors that determine the reduction potential of the core and to mimic other biologically... 

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