Proteinase degradation

The following protocol applies proteinase degradation prior to the phenol extraction... 

Cell wall-associated proteinases of Lactococcus can be classified into three groups, Pj-, Pm-, and mixed-type Pptype proteinases degrade /3- but not asi-casein at a significant rate, while Pm-type proteinases rapidly degrade both a- and /3-caseins (S. Visser etal., 1986). The nucleotide sequences... 

The phenol-water extraction method can contain small amounts of lipoproteins that could confound experiments designed to measure only LPS biological activity. These contaminating proteins can be removed by an alternative procedure described below, which incorporates proteinase degradation prior to... 

Serpins form very tight complexes with their corresponding serine pro-teinases, thereby inhibiting the latter. A flexible loop region of the serpin binds to the active site of the proteinases. Upon release of the serpin from the complex its polypeptide chain is cleaved by the proteinase in the middle of this loop region and the molecule is subsequently degraded. In addition to the active and cleaved states of the serpins there is also a latent state with an intact polypeptide chain that is functionally inactive and does not bind to the proteinase. 

Cathepsins are intracellular proteinases that reside within lysosomes or specific intracellular granules. Cathepsins are used to degrade proteins or pqffides that are internalised from the extracellular space. Some cathepsins such as cathepsin-G or cathepsin-K may be released from the cell to degrade specific extracellular matrix proteins. All cathepsins except cathepsin-G (serine) and cathepsin-D (aspartyl) are cysteine proteinases. 

Protein modification by the covalent attachment of ubiquitin chains serves as a signal to mark proteins for the degradation by a multicatalytic proteinase complex called the proteasome. Thus the ubiquitin proteasome system (UPS) controls the stability of proteins in a... 

Because of their very complex chemical structures and heterogeneity, melanins are difficult to extract, separate, and characterize from tissues. Eumelanins are insoluble in water and organic solvents. They can be extracted from tissues with strong chemicals that are capable of removing lipids, proteins, and other tissue components but also lead to the formation of degradation products. Enzymatic procedures were developed for the isolation of eumelanins from mammalian hair and irises. The first step is sequential digestion with protease, proteinase K, and papaine in the presence... 

In an earlier report (J>), the decay of healthy yam tubers during storage was shown to be a result of catabolism of its proteins by an active a-glutamyl transpeptidase. There is also some alkaline proteolytic activity in the yam tuber (6), but little information is available on individual enzymes of the purine degradative pathway and on the properties of an alkaline proteinase that may function in yams during storage. This report describes the interrelation of five enzymes of ureide metabolism in fresh and stored yams, the release of ammonia in vitro by three of the enzymes that may provide an environment for alkaline proteinase activity in vivo, and the in vitro properties of an... 

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