Protein sorting mitochondria

In spite of the variety of appearances of eukaryotic cells, their intracellular structures are essentially the same. Because of their extensive internal membrane structure, however, the problem of precise protein sorting for eukaryotic cells becomes much more difficult than that for bacteria. Figure 4 schematically illustrates this situation. There are various membrane-bound compartments within the cell. Such compartments are called organelles. Besides the plasma membrane, a typical animal cell has the nucleus, the mitochondrion (which has two membranes see Fig. 6), the peroxisome, the ER, the Golgi apparatus, the lysosome, and the endosome, among others. As for the Golgi apparatus, there are more precise distinctions between the cis, medial, and trans cisternae, and the TGN trans Golgi network) (see Fig. 8). In typical plant cells, the chloroplast (which has three membranes see Fig. 7) and the cell wall are added, and the lysosome is replaced with the vacuole. 

A variety of protein import pathways into the vacuole are known (Burd et al., 1998 Bryant and Stevens, 1998). It includes the sorting from the Golgi apparatus, endocytosis, autophagy (where a part of the cytoplasm such as a mitochondrion is engulfed into a newly formed vacuole and is degraded), direct import from the cytosol, and the vacuolar inheritance from the mother cell. Of these, the pathways from the Golgi... 

Cells must ensure that each newly synthesized protein is sorted to its correct location where it can carry out the appropriate function. This process is called protein targeting. In a eukaryotic cell, the protein may be destined to stay in the cytosol, for example an enzyme involved in glycolysis (see Topic J3). Alternatively it may need to be targeted to an organelle (such as a mitochondrion, lysosome, peroxisome, chloroplast or the nucleus) or be inserted into the plasma membrane or exported out of the cell. In bacteria such as E. coli, the protein may stay in the cytosol, be inserted into the plasma membrane or the outer membrane, be sent to the space between these two membranes (the periplasmic space) or be exported from the cell. In both prokaryotes and eukaryotes, if a protein is destined for the cytosol, it is made on free ribosomes in the cytosol and released directly into the cytosol. If it is destined for other final locations, specific protein-targeting mechanisms are involved. 

Protein targeting to both mitochondria and chloroplasts Involves the sorting of proteins to multiple sites within the respective organelle. Briefly list these sites. Taking the mitochondrion as an example and the proteins ADP/ATP antiporter and cytochrome b2 as the specific cases, compare and contrast the extent to which a common mechanism Is used for the site-specific targeting of these two proteins. 

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