Physical forces

Here, superscript F denotes relatively "free" molecules (weak physical forces), and D denotes relatively "bound" or "dimerized" molecules ("chemical" forces). 

The acid monolayers adsorb via physical forces [30] however, the interactions between the head group and the surface are very strong [29]. While chemisorption controls the SAMs created from alkylthiols or silanes, it is often preceded by a physical adsorption step [42]. This has been shown quantitatively by FTIR for siloxane polymers chemisorbing to alumina illustrated in Fig. XI-2. The fact that irreversible chemisorption is preceded by physical adsorption explains the utility of equilibrium adsorption models for these processes. 

The problems that occur when one tries to estimate affinity in terms of component terms do not arise when perturbation methods are used with simulations in order to compute potentials of mean force or free energies for molecular transformations simulations use a simple physical force field and thereby implicitly include all component terms discussed earlier. We have used the molecular transformation approach to compute binding affinities from these first principles [14]. The basic approach had been introduced in early work, in which we studied the affinity of xenon for myoglobin [11]. The procedure was to gradually decrease the interactions between xenon atom and protein, and compute the free energy change by standard perturbation methods, cf. (10). An (issential component is to impose a restraint on the... 

In such an experiment the material actually adsorbed by the solid (the adsorbent) is termed the adsorbate, in contradistinction to the adsorptive which is the the general term for the material in the gas phase which is capable of being adsorbed. The adsorption is brought about by the forces acting between the solid and the molecules of the gas. These forces are of two main kinds—physical and chemical—and they give rise to physical (or van der Waals ) adsorption, and chemisorption respectively. The nature of the physical forces will be dealt with in the next section meanwhile it is convenient to note that they are the same in nature as the van der Waals forces which bring about the condensation of a vapour to the liquid state. 

G. Baumaim, D. Hartenthaler, and K. Breslauer, CenterJorMdvancedBoodTechnolog —Physical Forces Research Mccomp/ishments,Report, Rutgers University, New Bmnswick, N.J., 1988. 

A prior distribution for sequence profiles can be derived from mixtures of Dirichlet distributions [16,51-54]. The idea is simple Each position in a multiple alignment represents one of a limited number of possible distributions that reflect the important physical forces that determine protein structure and function. In certain core positions, we expect to get a distribution restricted to Val, He, Met, and Leu. Other core positions may include these amino acids plus the large hydrophobic aromatic amino acids Phe and Trp. There will also be positions that are completely conserved, including catalytic residues (often Lys, GIu, Asp, Arg, Ser, and other polar amino acids) and Gly and Pro residues that are important in achieving certain backbone conformations in coil regions. Cys residues that form disulfide bonds or coordinate metal ions are also usually well conserved. 

In order for adhesives to function, there are a number of chemical and physical forces involved. Several principal mechanisms can play a role in adhering two substrates, including [13] ... 

More than 50 proteins have been discovered in the cytosol of nonmuscle cells that bind to actin and affect the assembly and disassembly of actin filaments or the cross-linking of actin filaments with each other, with other filamentous components of the cytoskeleton, or with the plasma membrane. Collectively, these are known as actin-binding proteins (ABPs). Their mechanisms of actions are complex and are subject to regulation by specific binding affinities to actin and other molecules, cooperation or competition with other ABPs, local changes in the concentrations of ions in the cytosol, and physical forces (Way and Weeds, 1990). Classifications of ABPs have been proposed that are based on their site of binding to actin and on their molecular structure and function (Pollard and Cooper, 1986 Herrmann, 1989 Pollard et al., 1994). These include the following ... 

In this section, an overview of the net transport of metals through rivers, estuaries, and the oceans provides an example of how these chemical and physical forces interact. 

Kinunerer WJ (2004) Open water processes of the San Francisco Estuary from physical forcing to biological responses. San Francisco Estuary Watershed Sci 2(1) Article 1. http // repositories.cdlib.org/Jmie/sfews... 

Parsegian, V. A. (1973). Long range physical forces in the biological milieu, Ann. Rev. Biophys. Bioeng., 2, 221-253. 

Debye-Huckel theory assumes complete dissociation of electrolytes into solvated ions, and attributes ionic atmosphere formation to long-range physical forces of electrostatic attraction. The theory is adequate for describing the behaviour of strong 1 1 electrolytes in dilute aqueous solution but breaks down at higher concentrations. This is due to a chemical effect, namely that short-range electrostatic attraction occurs... 

It is most convenient to explain catalysis using an example. We have chosen a hydrogenation catalysed by nickel in the metallic state. According to the schematic of Fig. 3.1 the first step in the actual catalysis is adsorption . It is useful to distinguish physisorption and chemisorption . In the former case weak, physical forces and in the latter case relatively strong, chemical forces play a role. When the molecules adsorb at an active site physisorption or chemisorption can occur. In catalysis often physisorption followed by chemisorption is the start of the catalytic cycle. This can be understood from Fig. 3.2, which illustrates the adsorption of hydrogen on a nickel surface. 

Water taken up by solid materials is generally classified as water bound by physical forces or water bound by chemical bonds. Physically bound water includes adsorbed water, trapped or liquid-inclusion water, and absorbed water. The physical adsorption of water occurs when water condenses or is held on the surface the surface includes the cracks, crevices, etc. of real materials. Liquid inclusion occurs during the crystallization process when bubbles of water are trapped. 

The physical forces involved in the hydrogen bond must include electrostatic and inductive forces in addition to London dispersion forces... 

These are age-long processes that involve the application of physical forces to remove contaminants in wastewater. It includes the following. 

The first attempt to analyze the flow pattern of an adiabatic gas-liquid two-phase flow in terms of the dominant physical forces acting on the system was made by Quandt (1965). The criteria for prediction of major flow patterns were developed... 

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