Multiple hydrophobic interactions

Hydrophobic interactions, on the other hand, are strong, indifferent to local details, and are relatively long range. If transient direct or water-separated contacts occur between nonpolar side chains, the net effect could be local organization and an overall compaction of the polypeptide chain. Whereas the strengths of hydrophobic interactions must be considerably reduced in 8 M urea, they clearly are not eliminated, as evidenced by the persistence of lipid bicelles. Thus hydrophobic interactions probably play some role in persistent global structure, the importance of which can be tested by replacing multiple hydrophobic side chains with similarly shaped polar ones. 

After initial cell fermentation and product extraction from the producer cells, the crude preparation is subject to multiple chromatographic steps, including ion-exchange, hydrophobic interaction chromatography and gel-filtration chromatography. The purified product is presented in lyophilized form in vials (1 mg active/vial) and excipients include a phosphate buffer, sodium chloride and serum albumin. 

These are defined as anionic dyes with substantivity for cellulosic fibres applied from an aqueous dyebath containing an electrolyte. The forces that operate between a direct dye and cellulose include hydrogen bonding, dipolar forces and non-specific hydrophobic interaction, depending on the chemical structure and polarity of the dye. Apparently multiple attachments are important, since linearity and coplanarity of molecular structure seem to be desirable features (section 3.2.1). The sorption process is reversible and numerous attempts have been made to minimise desorption by suitable aftertreatments (section 10.9.5). The two most significant non-textile outlets for direct dyes are the batchwise dyeing of leather and the continuous coloration of paper. 

There are a number of different enthalpic interactions that can occur between polymer and packing, and in many cases multiple interactions can exist depending on the chemical structure of the polymer. Enthalpic interactions that are related to water-soluble polymers include ion exchange, ion inclusion, ion exclusion, hydrophobic interactions, and hydrogen bonding (12)- Other types of interactions commonly encountered in SEC, as well as in all other chromatographic separations, are dispersion (London) forces, dipole interactions (Keeson and Debye forces), and electron-donor-acceptor interactions (20). 

Both of the tetraaza[3.3.3.3]paracyclophane (1) and tetraaza[n.l.n.l]paracyclo-phane (n = 6, 7, 8 cf. 2) rings have frequently been used as fundamental molecular skeletons for preparation of functionalized macrocyclic hosts [24-36]. Formation of three-dimensionally extended hydrophobic cavities was approached by introducing multiple hydrocarbon branches into the macrocyclic skeletons. Multiple hydrophobic chains thus placed in a macrocycle must be extended in the same direction and undergo mutual association to attain their optimal hydrophobic interactions in aqueous media due to thermodynamic reasons, while in nonaqueous media they presumably assume a free and separated configuration to minimize their mutual steric interactions. Consequently, such hydrophobic branches may provide a large hydrophobic cavity in aqueous media. 

Protein structure is stabilized by multiple weak interactions. Hydrophobic interactions are the major contributors to stabilizing the globular form of most soluble proteins hydrogen bonds and ionic interactions are optimized in the specific structures that are thermodynamically most stable. 

M de Frutos, A Cifuentes, JC Diez-Masa. Multiple peaks in high-performance liquid chromatography of proteins /3-lactoglobulins eluted in a hydrophobic interaction chromatography system. J Chromatogr A 778 43-52, 1997. 

In Mb, heme is located in the heme pocket via multiple noncovalent interactions such as Fe-His coordination, hydrophobic contacts with several nonpolar amino acid residues, and hydrogen bonding between heme propionates and polar amino acids (69). Therefore, the hemin can be easily removed from the heme pocket under acidic conditions to give apomyoglobin (apoMb) (70, 71). Over the past three decades, a variety of artificial iron porphyrins and porphyrinoids have been incorporated into the apoprotein to reconstitute the... 

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