Phylogenetics molecular

In the short history of nematode molecular phylogenetics, a number of different genes have already been used for analysis cytochrome c (Vanfleteren... 

Baldwin, J.G., Frisse, L.M., Vida, J.T., Eddleman, C.D. and Thomas, W.K. (1997) An evolutionary framework for the study of developmental evolution in a set of nematodes related to Caenorhabditis elegans. Molecular Phylogenetics and Evolution... 

Nadler, S.A. (1995) Advantages and disadvantages of molecular phylogenetics a case study of ascaridoid nematodes. Journal ofNematology 27, 423-432. 

Nadler, S.A. and Hudspeth, D.S.S. (1998) Ribosomal DNA and phylogeny of the Ascaridoidea (Nemata Secernentea) implications for morphological evolution and classification. Molecular Phylogenetics and Evolution 10, 221-236. 

Xie, X., Bain, O. and Williams, S.A. (1994) Molecular phylogenetic studies on filarial parasites based on 5S ribosomal spacer sequences. Parasite 1,141-151. 

Wesson, D.M., Porter, C. and Collins, F.H. (1992) Sequence and secondary structure comparisons of ITS rDNA in mosquitoes (Diptera Culicidae). Molecular Phylogenetics and Evolution 1, 253—269. 

Biswas SK, Wang L, Yokoyama K et al (2005) Molecular phylogenetics of the genus Trichosporon inferred from mitochondrial Cytochrome b gene sequences. J Clin Microbiol 43 5171-5178... 

Adachi, J., and Hasegawa, M. (1992). MOLPHY Programs for molecular phylogenetics, I. PROTML maximum likelihood inference of protein phylogeny, Computer Science Monograph no. 2 7. Institute of Statistical Mathematics, Tokyo. 

With the advent of protein sequencing, also in the 1950s, attempts were made to study protein variation directly on the primary structure. However, the method was very expensive and time-consuming and could not be applied to population genetics. It remained confined to evolutionary study of differences between species (applied to molecular phylogenetics) and to the demonstration of sequence mutation in important heritable diseases. 

Hugenholtz P, Pace NR. 1996. Identifying microbial diversity in the natural environment a molecular phylogenetic approach. Trends Biotechnol 14 190-7. 

Wink, M. 2003. Evolution of secondary metabolities from an ecological and molecular phylogenetic perspective. Phytochemistry, 64 1 3-19. 

Wink, M. Evolution of Secondary Metabolites from an Ecological and Molecular Phylogenetic Perspective. Phytochemistry 2003 64 3-19. 

Sinnappah, N.D., Lim, L.H.S., Rohde, K., Tinsley, R., Combes, C. and Verneau, O. (2001) A paedomorphic parasite associated with a neotenic amphibian host phylogenetic evidence suggests a revised systematic position for Sphyranuridae within anuran and turtle Polystomatoineans. Molecular Phylogenetics and Evolution 18, 1 89-201. 

Ruiz-Trillo, I., Riutort, M., Fourcade, H.M., Baguna, J. and Boore, J.L. (2004) Mitochondrial genome data support the basal position of Acoelomorpha and the polyphyly of the platyhelminthes. Molecular Phylogenetics and Evolution 33, 321-332. 

Blair, D., Bray, R.A. and Barker, S.C. (1998) Molecules and morphology in phylogenetic studies of the Hemiuroidea (Digenea Trematoda Platyhelminthes). Molecular Phylogenetics and Evolution 9, 15-25. 

Despres, L., Imbert-Establet, D., Combes, C. and Bonhomme, F. (1992) Molecular evidence linking hominoid evolution to recent radiation of schistosomes (Platyhelminthes Trematoda). Molecular Phylogenetics and Evolution 1,295-304. 

Hancock, J.M. and Vogler, A.P. (2000) How slippage-derived sequences are incorporated into rRNA variable-region secondary structure implications for phylogeny reconstruction. Molecular Phylogenetics and Evolution 14, 366-374. 

Lydeard, C., Holznagel, W.E., Schnare, M.N. and Gutell, R.R. (2000) Phylogenetic analysis of molluscan mitochondrial LSU rDNA sequences and secondary structures. Molecular Phylogenetics and Evolution 15, 83-102. 

Inward, D., Beccaloni, G. and Eggleton, P. (2007). Death of an Order a comprehensive molecular phylogenetic study confirms that termites are eusocial cockroaches. Biol. Lett., 3, 331-335. 

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