Malonyl-CoA formation

Except for malonyl-CoA formation, all the individual reactions for palmitate synthesis reside on a single multifunctional protein (fatty acid synthase) in animal cells. It has been shown that a dimer of the multifunctional protein is required to catalyze palmitate synthesis. Explain the molecular basis of this observation. 

Acetyl CoA is converted to malonyl CoA and into fatty acids as described previously. The enzyme that carries out the first committed step for fatty-acid synthesis, acetyl CoA carboxylase, is finely controlled both allosterically and covalently. This enzyme can occur in a monomeric inactive form or a polymeric active form. One factor that affects this is citrate, which stimulates the polymeric or active form of acetyl CoA carboxylase. Thus, citrate plays an important role in lipogenesis as (1) a source of cytosolic acetyl CoA, (2) an allosteric positive effector of acetyl CoA carboxylase, and (3) a provider of oxaloacetate in the cytosol, which can allow transhydrogenation from NADH to NADPH. An allosteric inhibitor of acetyl CoA carboxylase that causes dissociation to the monomeric form is fatty-acyl CoA. Thus, if exogenous fatty acids are available, there is little reason to synthesize more fatty acids. Fatty-acyl CoA in the cytosol decreases malonyl CoA formation by inhibiting acetyl CoA carboxylase. 

Malonyl-ACP, formed from acetyl-CoA (shuttled out of mitochondria) and CO2, condenses with an acetyl bound to the Cys—SH to yield acetoacetyl-ACP, with release of CO2. This is followed by reduction to the n-/3-hydroxy derivative, dehydration to the trans-t -unsaturated acyl-ACP, and reduction to butyryl-ACP. NADPH is the electron donor for both reductions. Fatty acid synthesis is regulated at the level of malonyl-CoA formation. 

Biotin Coenzyme in decarhoxylatiDn liemoval of carhon ditmtiel and camoxyiatiDn ladditinn of carbon dioxidel reactions of caibohydiate, fat, and protein metabolism for esara-pie, pyiuvic acid to oxaloaceiic acid, and acetyl CoA to malonyl CoA formation of purines torraation of urea deamination of ammo adds. 

Formation of Malonyl-CoA Activates Acetate Units for Fatty Acid Synthesis... 

The acetate units are activated by formation of malonyl-CoA (at the expense of ATP). 

Acetate Units Are Committed to Fatty Acid Synthesis by Formation of Malonyl-CoA... 

FIGURE 25.2 (a) The acetyl-CoA carboxylase reaction produces malonyl-CoA for fatty acid synthesis, (b) A mechanism for the acetyl-CoA carboxylase reaction. Bicarbonate is activated for carboxylation reactions by formation of N-carboxybiotin. ATP drives the reaction forward, with transient formation of a carbonylphosphate intermediate (Step 1). In a typical biotin-dependent reaction, nncleophilic attack by the acetyl-CoA carbanion on the carboxyl carbon of N-carboxybiotin—a transcarboxylation—yields the carboxylated product (Step 2). 

Mammals can add additional double bonds to unsaturated fatty acids in their diets. Their ability to make arachidonic acid from linoleic acid is one example (Figure 25.15). This fatty acid is the precursor for prostaglandins and other biologically active derivatives such as leukotrienes. Synthesis involves formation of a linoleoyl ester of CoA from dietary linoleic acid, followed by introduction of a double bond at the 6-position. The triply unsaturated product is then elongated (by malonyl-CoA with a decarboxylation step) to yield a 20-carbon fatty acid with double bonds at the 8-, 11-, and 14-positions. A second desaturation reaction at the 5-position followed by an acyl-CoA synthetase reaction (Chapter 24) liberates the product, a 20-carbon fatty acid with double bonds at the 5-, 8-, IT, and ITpositions. 

Following the formation of malonyl CoA, another nucleophilic acyl substitution reaction occurs in step 4 to form the more reactive malonyl ACP, thereby binding the malonyl group to an ACP arm of the multienzyme synthase. At this point, both acetyl and malonyl groups are bound to the enzyme, and the stage is set for their condensation. 

To clarify the characteristics of AMDase, the effects of some additives were examined using phenylmalonic acid as the representative substrate. The addihon of ATP and coenzyme A did not enhance the rate of the reaction, different from the case of malonyl-CoA decarboxylase and others in those, ATP and substrate acid form a mixed anhydride, which in turn reacts with coenzyme A to form a thiol ester of the substrate. In the present case, as both ATP and CoA-SH had no effect, the mechanism of the reaction will be totally different from the ordinary one described above. It is well estabhshed that avidin is a potent inhibitor of the formation of the biotin-enzyme complex. In the case of AMDase, addition of avidin has no influence on the enzyme activity, indicating that AMDase is not a biotin enzyme. 

The first formation of a carbon-carbon bond occurs between malonyl and acetyl units bound to fatty acid synthase. After reduction, dehydration, and further reduction, the acyl enzyme is condensed with more malonyl-CoA and the cycle is repeated until the acyl chain grows to C16. When the growing fatty acid reaches a chain length of 16 carbons, the acyl group is hydrolyzed to give the free fatty acid. 

Members of the CHS/STS family of condensing enzymes are relatively modest-sized proteins of 40-47 kDa that function as homodimers. Each enzyme typically reacts with a cinnamoyl-CoA starter unit and catalyzes three successive chain extensions with reactive acetyl groups derived from enzyme catalyzed decarboxylation of malonyl-CoA.11 Release of the resultant tetraketide together with or prior to polyketide chain cyclization and/or decarboxylation yields chalcone or resveratrol (a stilbene). Notably, CHS and STS catalyze identical reactions up to the formation of the intermediate tetraketide. Divergence occurs during the termination step of the biosynthetic cascade as each tetraketide intermediate undergoes a distinct cyclization reaction (Fig. 12.2). 

Figure 12.8 A. 2-PS reaction. B. Surface representations of the CHS (left) and 2-PS (right) active site cavities are shown. The catalytic cysteines (red), the three positions that convert CHS into 2-PS (green), and the substitution that does not affect product formation (blue) are highlighted. C. TLC analysis of CHS, 2-PS, and CHS mutant enzymes. The radiogram shows the radiolabeled products produced by incubation of each protein with [14C]malonyl-CoA and either p-coumaroyl-CoA (C) or acetyl-CoA (A). Numbering of mutants corresponds to CHS with 2-PS numbering in parenthesis. Positions of reaction products and their identities are indicated.

KREUZALER, F., HAHLBROCK, F., Enzymatic synthesis of aromatic compounds in higher plants. Formation of fe-noryangonin (4-hydroxy-6[4-hydroxystyryl]2-pyrone) from p-coumaroyl-CoA and malonyl-CoA, Arch. Biochem. Biophys., 1975, 169, 84-90. 

Triglyceride and fatty acid synthesis are promoted by insulin stimulation of liver and adipose tissues by causing the phosphorylation of the first and controlling enzyme in the pathway acetyl-CoA carboxylase (see Section 6.3.2). This enzyme catalyses the formation of malonyl-CoA and requires both allosteric activation by citrate and covalent modification for full activity. 

The enzymatic reaction was performed at 30 °C for 2 hours in a volume of 1 ml of 250 mM phosphate buffer (pH 6.5) containing 50 mM of KOH, 32 U/ml of the enzyme, and [1- C]-substrate. The product was isolated as the methyl ester. When the (S)-enantiomer was employed as the substrate, C remained completely in the product, as confirmed by C NMR and HRMS. In addition, spin-spin coupling between and was observed in the product, and the frequency of the C-O bond-stretching vibration was down-shifted to 1690 cm" (cf. 1740 cm for C-O). On the contrary, reaction of the (R)-enantiomer resulted in the formation of (R)-monoacid containing C only within natural abundance. These results clearly indicate that the pro-R carboxyl group of malonic acid is ehminated to form (R)-phenylpropionate with inversion of configuration [28]. This is in sharp contrast to the known decarboxylation reaction by malonyl CoA decarboxylase [1] and serine hydroxymethyl transferase [2], which proceeds with retention of configuration. 

Figure 7.14 Regulation of rate of fatty acid oxidation in tissues. Arrows indicate direction of change (i) Changes in the concentrations of various hormones control the activity of hormone-sensitive lipase in adipose tissue (see Figure 7.10). (ii) Changes in the blood level of fatty acid govern the uptake and oxidation of fatty acid, (iii) The activity of the enzyme CPT-I is controlled by changes in the intracellular level of malonyl-CoA, the formation of which is controlled by the hormones insulin and glucagon. Insulin increases malonyl-CoA concentration, glucagon decrease it. Three factors are important TAG-lipase, plasma fatty acid concentration and the intracellular malonyl-CoA concentration.

Figure 11.6 The physiological pathway for fatty acid synthesis acetyl-CoA to palmitoyl-CoA. The pathway starts with the conversion of acetyl-CoA to malonyl-CoA in the cytosol, which is the flux-generating step catalysed by acetyl-CoA carboxylase. The pathway can be considered to end with formation of palmitoyl-CoA rather than palmitate, since it has several fates formation of triacylglycerol and phospholipids or acylation of other compounds.

Biotin (5) is the coenzyme of the carboxylases. Like pyridoxal phosphate, it has an amide-type bond via the carboxyl group with a lysine residue of the carboxylase. This bond is catalyzed by a specific enzyme. Using ATP, biotin reacts with hydrogen carbonate (HCOa ) to form N-carboxybiotin. From this activated form, carbon dioxide (CO2) is then transferred to other molecules, into which a carboxyl group is introduced in this way. Examples of biotindependent reactions of this type include the formation of oxaloacetic acid from pyruvate (see p. 154) and the synthesis of malonyl-CoA from acetyl-CoA (see p. 162). 

The a is L-lysine, as in the case of piperidine, but the f3 is different. The /3 is a-aminoadipic acid 6-semialdehyde. The q> is L-pipecolic acid, which is synthesized in plants from piperideine-6-carboxylic acid. In the case of many other organisms, the obligatory intermedia (q>) is derived from the /3. The

ring structure. The indolizidine nucleus will be formed only in the synthesis of the x- The deep structmal change occms when

Claisen reaction with acetyl or malonyl CoA (Cra/mCoA) and the ring closme process (by amide or imine) to 1-indolizidinone, which is the x- The second obligatory intermedia ( k ) only has the indolizidine nucleus. 

Formation of malonyl CoA is the rate-limiting and principal regulatory step of fatty acid synthesis. 

The key enzymes involved in the formation of the hydroxycinnamic acids (HCAs) from phenylalanine and malonyl-CoA are now discussed in detail, while later sections address the branches of the flavonoid pathway leading to anthocyanins, aurones, flavones, flavonols, PAs, and isotlavonoids. This is followed by brief reviews of the regulation of flavonoid biosynthesis and the use of flavonoid genes in plant biotechnology. To assist the reader. Figure 3.1 presents the carbon numbering for the various flavonoid types discussed. 

The formation of malonyl-CoA from acetyl-CoA is an irreversible process, catalyzed by acetyl-CoA carboxylase. The bacterial enzyme has three separate polypeptide subunits (Fig. 21-1) in animal cells, all three... 

The core of the E. coli fatty acid synthase system consists of seven separate polypeptides (Table 21-1), and at least three others act at some stage of the process. The proteins act together to catalyze the formation of fatty acids from acetyl-CoA and malonyl-CoA. Throughout the process, the intermediates remain covalently attached as thioesters to one of two thiol groups of the synthase complex. One point of attachment is the —SH group of a Cys residue in one of the seven synthase proteins (j3-ketoacyl-ACP synthase) the other is the —SH group of acyl carrier protein. 

---