Intramolecular biological

Table I. Some Rates of Intramolecular Biological Electron Transfer...

Benzo[b]thiophene-2,3-quinone, 5-chloro-oxidation, 4, 824 Benzothiophenes, 4, 863-934 biological activity, 4, 911-913 intramolecular acylation, 4, 761 mass spectrometry, 4, 739 metabolism, 1, 242 phosphorescence, 4, 16 reactivity, 4, 741-861 spectroscopy, 4, 713-740 structure, 4, 713-740 substituents reactivity, 4, 796-839... 

Several features of these RNA enzymes, or ribozymes, lead to the realization that their biological efficiency does not challenge that achieved by proteins. First, RNA enzymes often do not fulfill the criterion of catalysis in vivo because they act only once in intramolecular events such as self-splicing. Second, the catalytic rates achieved by RNA enzymes in vivo and in vitro are... 

In view of the importance of water in chemistry and biology, there have been many attempts to construct simple yet effective intramolecular potentials for water molecules. Water monomers are traditionally left rigid. The early three-site model for water took positive charges on the hydrogens ( h) and a negative charge (qo = on the oxygen, and wrote the pair potential between two... 

Tliere are several reasons for this great interest in the tautomerism of porphyrins (which could justify its own review) (1) their biological significance, (2) their applications in material science ( hole burning is related to their tautomerism), (3) the simplicity of the system (annular tautomerism involving intramolecular proton transfer both in solution and in the solid state), and (4) the possibility of elucidating the kinetic processes in great detail. 

A closely related oxygenated heterocyclic system devoid of acidic groups interestingly shows quite different biological activity. Thus, condensation of the benzofuran hydroxyketone 66 with ethyl thiomethyl acetate (67) probably proceeds initially by formation of the acylation product 68. Intramolecular dehydration leads to formation of a pyran ring. There is thus obtained the hypo-cholesterolemic agent timefurone (69) [14],... 

The biological function of biopolymers such as polypeptides, proteins, nucleic acids etc. depends strongly on their ordered structure which is determined by the pattern of inter- and intramolecular interactions given by the primary structure. 

Furthermore, intramolecular hydrogen bonding is one of the chief factors in determining the structure of such important biological substances as proteins, as discussed in Chapter 24. 

Kanematsu K. Molecular Design and Syntheses of Biologically Active Compounds Via Intramolecular Allene Cycloaddition Reaction Strategy Rev. Heteroat. Chem. 1993 9 231-259... 

A radical carboxyarylation approach was introduced as the key step in the total synthesis of several biologically important natural products (Scheme 27). Treatment of thiocarbonate derivatives 112 (R = Me or TBS) with 1.1 equiv of (TMS)3SiH in refluxing benzene and in the presence of AIBN (0.4 equiv added over 6h) as radical initiator, produced compound 113 in 44% yield. This remarkable transformation resulted from a radical cascade, involving (TMSlsSi radical addition to a thiocarbonyl function (112 114), 5-era cyclization (114->115) and intramolecular 1,5-ipso substitution (115 116) with the final ejection of (TMSlsSiS radical. 

Figure 35-11. Typical aminoacyl tRNA in which the amino acid (aa) is attached to the 3 CCA terminal. The anticodon, "PPC, and dihydrouracil (D) arms are indicated, as are the positions of the intramolecular hydrogen bonding between these base pairs. (From Watson JD Molecular Biology of the Gene, 3rd ed. Copyright ...

The relevance of lipophilicity in pharmacodynamics is due to the fact that inter-and intramolecular interactions governing lipophiUcity (Sections 12.1.1.2 and 12.1.1.3) are of the same nature as those that govern drug recognition and binding to biological sites of action [3, 4, 15]. 

There are numerous examples of intramolecular Heck reactions,151 such as in Entries 10 to 14. Entry 11 is part of a synthesis of the antitumor agent camptothecin. The Heck reaction gives an 11 1 endocyclic-exocyclic mixture. Entries 12-14 are also steps in syntheses of biologically active substances. Entry 12 is part of a synthesis of maritidine, an alkaloid with cytotoxic properties the reaction in Entry 13 is on a route to galanthamine, a potential candidate for treatment of Alzheimer s disease and Entry 14 is a key step in the synthesis of a potent antitumor agent isolated from a marine organism. 

Intramolecular arylations are possible and several studies have examined the synthesis of biologically active compounds such as oxindoles.181 For example, a synthesis of physovenine has been reported using this methodology. 

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