Inheritance nuclear

There are two evolutionary questions relevant to the clonal inheritance of the Y chromosome. First, do haploid nuclear sequences that do not recombine in meiosis evolve in a different manner and at a different rate than autosomal or X chromosomal sequences which do recombine Second, are clonally inherited nuclear sequences useful for phylogeny reconstruction ... 

Mitochondria are unique organelles in that they contain their own DNA (mtDNA), which, in addition to ribosomal RN A (rRNA) and transfer RN A (tRNA)-coding sequences, also encodes 13 polypeptides which are components of complexes I, III, IV, and V (Anderson et al., 1981). This fact has important implications for both the genetics and the etiology of the respiratory chain disorders. Since mtDNA is maternally-inherited, a defect of a respiratory complex due to a mtDNA deletion would be expected to show a pattern of maternal transmission. However the situation is complicated by the fact that the majority of the polypeptide subunits of complexes I, III, IV, and V, and all subunits of complex II, are encoded by nuclear DNA. A defect in a nuclear-coded subunit of one of the respiratory complexes would be expected to show classic Mendelian inheritance. A further complication exists in that it is now established that some respiratory chain disorders result from defects of communication between nuclear and mitochondrial genomes (Zeviani et al., 1989). Since many mitochondrial proteins are synthesized in the cytosol and require a sophisticated system of posttranslational processing for transport and assembly, it is apparent that a diversity of genetic errors is to be expected. 

The use of protoplasts in studies of stress physiology and biochemistry expands the advantages of cell culture systems discussed in the preceding sections. Additional applications are related to the fusion of protoplasts. Intraspecifie and interspecific protoplast fusion greatly enhance genetic variability of the fused protoplasts (Kumar Cocking, 1987). The resulting somatic hybrids provide cells which can be used for selection of specific traits (e.g. environmental stress tolerance) provided by one or both donor cells and for basic studies on cytoplasmic and nuclear inheritance of desired characteristics. 

Mutations (eg, point mutations, or in some cases deletions) in the genes (nuclear or mitochondrial) encoding various proteins, enzymes, or tRNA molecules are the fundamental causes of the inherited cardiomyopathies. Some conditions are mild, whereas others are severe and may be part of a syndrome affecting other tissues. 

Not all the cellular DNA is in the nucleus some is found in the mitochondria. In addition, mitochondria contain RNA as well as several enzymes used for protein synthesis. Interestingly, mitochond-rial RNA and DNA bear a closer resemblance to the nucleic acid of bacterial cells than they do to animal cells. For example, the rather small DNA molecule of the mitochondrion is circular and does not form nucleosomes. Its information is contained in approximately 16,500 nucleotides that func-tion in the synthesis of two ribosomal and 22 transfer RNAs (tRNAs). In addition, mitochondrial DNA codes for the synthesis of 13 proteins, all components of the respiratory chain and the oxidative phosphorylation system. Still, mitochondrial DNA does not contain sufficient information for the synthesis of all mitochondrial proteins most are coded by nuclear genes. Most mitochondrial proteins are synthesized in the cytosol from nuclear-derived messenger RNAs (mRNAs) and then transported into the mito-chondria, where they contribute to both the structural and the functional elements of this organelle. Because mitochondria are inherited cytoplasmically, an individual does not necessarily receive mitochondrial nucleic acid equally from each parent. In fact, mito-chondria are inherited maternally. 

Mitochondrial DNA is inherited maternally. What makes mitochondrial diseases particularly interesting from a genetic point of view is that the mitochondrion has its own DNA (mtDNA) and its own transcription and translation processes. The mtDNA encodes only 13 polypeptides nuclear DNA (nDNA) controls the synthesis of 90-95% of all mitochondrial proteins. All known mito-chondrially encoded polypeptides are located in the inner mitochondrial membrane as subunits of the respiratory chain complexes (Fig. 42-3), including seven subunits of complex I the apoprotein of cytochrome b the three larger subunits of cytochrome c oxidase, also termed complex IV and two subunits of ATPase, also termed complex V. 

Defects of nuclear DNA also cause mitochondrial diseases. As mentioned above, the vast majority of mitochondrial proteins are encoded by nDNA, synthesized in the cytoplasm and imported into the mitochondria through a complex series of steps. Diseases can be due to mutations in genes encoding respiratory chain subunits, ancillary proteins controlling the proper assembly of the respiratory chain complexes, proteins controlling the importation machinery, or proteins controlling the lipid composition of the inner membrane. All these disorders will be transmitted by mendelian inheritance. From a biochemical point of view, all areas of mitochondrial metabolism can be affected (see below). 

But the proof is deceptively simple [31]. Because the shape function is proportional to the electron density, it inherits the characteristic electron-nuclear coalescence cusps at the positions of the atomic nuclei [32,33]. The location of those cusps determines the positions of the nuclei, R the steepness of the cusps determines the atomic charges, Za. So the shape function determines the external potential for any molecular system [31]. 

We have the 120 million base pair nuclear genome for Chlamydomonas, a unicellular, photosynthetic green alga. This organism diverged from land plants more than one billion years ago. It is a ciliated organism, an innovation inherited from a progenitor of animals and plants, subsequently lost in land plants. 

It is important to emphasise that only the head of the sperm enters, so that it is only the nuclear genetic material that enters the ovum, that is, the genetic material in the mitochondria of the sperm does not enter the ovum and hence it does not appear in the zygote. Consequently, mitochondrial genes are inherited only from the mother. This has implications for some mitochondrial diseases (Chapter 9). 

It should be noted that odd elements produced in explosive nucleosynthesis depend less on metalhcity than their counterparts fashioned by slow (hydrostatic) nucleosynthesis, for the n/p ratio is steadily modified by various weak interactions operating in the advanced stages. In other words, the n/p ratio deep down in the star, in regions affected by explosive nucleosynthesis, no longer reflects the initial ratio inherited from the interstellar medium. At least, this is what calculations suggest. However, the cause of all these phenomena remains relatively obscure, given the complex way in which nuclear reactions are interwoven within massive stars in the advanced stages of their evolution. 

While DNA is more robust than often depicted in movies, age and extreme conditions such as a fire can substantially degrade it. In such cases, mitochondrial DNA (mtDNA) is best used. Unlike nuclear DNA, mitochondrial genome exists in thousands of copies, is less apt to degrade, and is inherited only from the mother. Here, STRs are not analyzed, but rather the focus is on variable regions of the mitochondrial genome. Such analyses take much longer but are used for situations where time is not essential. 

A mutation in any of the 13 protein subunits, the 22 tRNAs, or the two rRNAs whose genes are carried in mitochondrial DNA may possibly cause disease. The 13 protein subunits are all involved in electron transport or oxidative phosphorylation. The syndromes resulting from mutations in mtDNA frequently affect oxidative phosphorylation (OXPHOS) causing what are often called "OXPHOS diseases."3-6 Mitochondrial oxidative phosphorylation also depends upon 100 proteins encoded in the nucleus. Therefore, OXPHOS diseases may result from defects in either mitochondrial or nuclear genes. The former are distinguished by the fact that they are inherited almost exclusively maternally. Most mitochondrial diseases are rare. However, mtDNA is subject to rapid mutation, and it is possible that accumulating mutants in mtDNA may be an important component of aging.h k... 

Although DNA mutations in nuclear DNA may cause mitochondrial dysfunction, the majority of genetically defined mitochondrial diseases are caused by mutations in mtDNA (M15, PI, S4). Point mutations and deletions of mtDNA have been reported to be associated with or responsible for mitochondrial myopathies and/or encephalomyopathies (M15, PI, S4). Patients with such diseases usually manifest major clinical symptoms early in life and at a later stage may develop additional multisystem disorders such as encephalopathy and/or peripheral neuropathy. Most of the mitochondrial myopathies occur sporadically and are often caused by large-scale mtDNA deletions (PI). However, there are several reports on maternally inherited mitochondrial myopathy and familial mitochondrial myopathy. These patients usually harbor a specific mtDNA mutation and often exhibit defects in NADH-CoQ reductase and/or cytochrome c oxidase. 

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