Glutamic acid residues

Fig. 12. Tryptic map of it-PA (mol wt = 66,000) showing peptides formed from hydrolysis of reduced, alkylated rt-PA. Separation by reversed-phase octadecyl (C g) column using aqueous acetonitrile with an added acidic agent to the mobile phase. Arrows show the difference between A, normal, and B, mutant rt-PA where the glutamic acid residue, D, has replaced the normal arginine residue, C, at position 275.

Gla y-carboxyl glutamic acid residues. (...) are used to bring sequences into alignment for greater homology. 

Protein S. Protein S is a single-chain molecule of approximately 78,000 daltons that contains 10 y-carboxy glutamic acid residues in the NH -terminal portion of the molecule. Protein S is a regulatory vitamin K-dependent protein. In plasma 40% of this protein circulates free and 60% circulates bound to C4b binding protein. Free Protein S functions as a nonenzymatic cofactor that promotes the binding of Protein C to membrane surfaces (22—25). 

Figure 1.9 Examples of functionally important intrinsic metal atoms in proteins, (a) The di-iron center of the enzyme ribonucleotide reductase. Two iron atoms form a redox center that produces a free radical in a nearby tyrosine side chain. The iron atoms are bridged by a glutamic acid residue and a negatively charged oxygen atom called a p-oxo bridge. The coordination of the iron atoms is completed by histidine, aspartic acid, and glutamic acid side chains as well as water molecules, (b) The catalytically active zinc atom in the enzyme alcohol dehydrogenase. The zinc atom is coordinated to the protein by one histidine and two cysteine side chains. During catalysis zinc binds an alcohol molecule in a suitable position for hydride transfer to the coenzyme moiety, a nicotinamide, [(a) Adapted from P. Nordlund et al., Nature 345 593-598, 1990.)...

Many proteins contain intrinsic metal atoms that are functionally important. The most frequently used metals are iron, zinc, magnesium, and calcium. These metal atoms are mainly bound to the protein through the side chains of cysteine, histidine, aspartic acid, and glutamic acid residues. 

Noncollagenous Ca2+-binding proteins bind to bone minerals. They contain stretches of y-glutamic acid residues necessary for Ca2+-binding. 

In bone, three proteins have been described which are vitamin K-dependent, osteocalcin (bone Gla protein), matrix Gla protein (MGP), and protein S. Osteocalcin is synthetized by osteoclasts, regulated by the active form of vitamin D, calcitriol. Its capacity to bind calcium needs a vitamin K-dependent y-carboxylation of three glutamic acid residues. The calcium binding capacity of osteocalcin indicates a possible role in bone mineralization, but its exact function is still unclear. However, it is widely used as a serum marker for bone mineralization. Protein S, mainly a coagulant, is also vitamin-K dependent and synthesized in the liver. Children with... 

The digestion of the protein, after heme removal, using Glu-C endoproteinase was also carried out. This enzyme cleaves the polypeptide backbone on the carboxyl terminus of a glutamic acid residue and in this case yielded twelve chromatographic responses. Despite two of these arising from unresolved components, molecular weight information was obtained from 15 polypeptides, one of which was the intact protein, covering the complete sequence, as shown in Table 5.10. 

This polypeptide is structurally identical to ABA-type triblock copolymer with a central hydrophdic elastomeric end-block capped with two hydrophobic plastic end-blocks and exhibits amphiphilic characteristics. The end-blocks of the polymer were chosen in such a way that their LCST would reside at or near room temperature. Thus the polymer exhibits phase separation, which is analogue to conventional TPEs, and offers TPE gels under physiological relevant conditions [104]. Glutamic acid residue is placed periodically in the elastomeric mid-block to increase its affinity towards the aqueous... 

DW Urry, SQ Peng, TM Parker. Delineation of electrostatic-induced and hydrophobic-induced pKa shifts in polypentapeptides—The glutamic acid residue. J Am Chem Soc 115 7509-7510, 1993. 

Plaquet et al. (PI) found in the urine of rachitic children peptides consisting of proline, hydroxyproline, and glycine, which they believed to be the products of collagen degradation. Two similar peptides containing considerable amounts of proline and hydroxyproline were isolated from the urine of a patient with rheumatoid arthritis by Mechanic et al. (Ml). One of these peptides consisted of three proline, two hydroxyproline, and nine glutamic acid residues, the second one consisted of four proline, four hydroxyproline, and one glutamic acid residues. The N-terminal amino acid in the first peptide was demonstrated to be hydroxyproline. 

All the evidence presented in this section concerns aspartic acid residues, and one may wonder whether glutamic acid residues display similar reactivity. The answer is clearly that they do not, in particular for entropy reasons. In fact, replacement of a reactive aspartic acid residue by a glutamic acid residue can greatly increase the chemical stability of a peptide. This is exemplified by human epidermal growth factor (hEGF), an important promoter of... 

A high proportion of the positiveiy charged basic amino acids lysine and arginine within these flexible tails are frequent targets for extensive posttranslational modifications (Berger, 2002). Such modifications include the acetylation of lysine residues, the methylation of lysine and arginine residues, the ubiquitination of lysine residues, the phosphorylation of serine and threonine residues, the sumoylation of lysine residues, and the poly ADP-ribosylation of glutamic acid residues. 

K Carboxylation of glutamic acid residues in many Ca +-binding proteins, importantly coagulation factors II, VII, EX, and X, as well as protein C and protein S... 

Heating of foods rich in proteins may lead to formation of crosslinking isopeptide bonds between the S-NH2 group of lysine and the p- and y-carboxyl groups of aspartic and glutamic acid residues or their amides. 

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