Glass slide group

Figure 17.3 Maleimide-modified glass slides (1) can be derivatized using two chemoselective ligation reactions to create biotin modifications. In the first step, alkyne-PEG4-cyclopentadiene linkers (2) are added to the maleimide groups using a Diels-Alder reaction. In the second reaction, an azido-PEG4-biotin compound (3) is reacted with the terminal alkyne on the slide using click chemistry to result in another cycloaddition product, a triazole ring.

An amine-containing surface, such as an APTS-modified glass slide (see Chapter 13, Section 2), may be modified with a long-chain NHS-salicylic acid methyl ester derivative (Lonza), which then can be converted to the SHA group for coupling to a P(D)BA-modified protein. The following protocol describes this method. 

Chitosan (Fig. 16) is an amino-modified natural polysaccharide that canbe also used as a polymeric gel for the covalent binding of OND probes [61]. Chitosan offers several advantages for NA immobilization. Its pH responsive properties allow it to be easily immobilized onto glass slides for the construction of arrays. Specifically, chitosan is soluble at low pH, when its amine groups are protonated, but becomes insoluble when the pH is raised above its pKa 6.3). 

In a different approach, fluorescence-based DNA microarrays are utilized (88). In a model study, chiral amino acids were used. Mixtures of a racemic amino acid are first subjected to acylation at the amino function with formation of A-Boc protected derivatives. The samples are then covalently attached to amine-functionalized glass slides in a spatially arrayed manner (Fig. 10). In a second step, the uncoupled surface amino functions are acylated exhaustively. The third step involves complete deprotection to afford the free amino function of the amino acid. Finally, in a fourth step, two pseudo-Qn nX. om.Qx c fluorescent probes are attached to the free amino groups on the surface of the array. An appreciable degree of kinetic resolution in the process of amide coupling is a requirement for the success of the ee assay (Horeau s principle). In the present case, the ee values are accessible by measuring the ratio of the relevant fluorescent intensities. About 8000 ee determinations are possible per day, precision amounting to +10% of the actual value ((S(S). Although it was not explicitly demonstrated that this ee assay can be used to evaluate enzymes (e.g., proteases), this should in fact be possible. So far this approach has not been extended to other types of substrates. 

A typical experimental apparatus for studying photorefractivity in liquid crystals is illustrated in Fig. 2. Two coherent laser beams from an Ar+ laser are crossed in the sample, with a total of 5 mW of p-polarized output at 514 nm. The beams are unfocused and have a 1/e diameter of 2.5 mm. The liquid crystal composite is sandwiched between two ITO coated glass slides that are coated with octadecyl-silyl groups to induce the liquid crystal director to align perpendicular to the face of the glass slides, that is, homeotropic alignment [43], The cell thickness is determined by a Teflon spacer that is 12 to 100 p,m thick. A small electric field... 

Electrostatic self-assembly was combined with supramolecular chemistry to obtain inclusion complexes of a polymeric nonlinear optical (NLO) active dye and modified [3-cyclodextrin with induced chromophore orientation [37], The polyanion is a N,N-diallyl-aniline and sodium-2-acrylamido-2-methylpropanesulfonate copolymer functionalized with pendant azo group. The modified /i-cyclodextrin oligo-cation was obtained by treatment of hcptakis(6-dco y-6-iodo-/i-cyclodcxtrin) with excess pyridine. A linear polyamine, chitosan, was also combined with the polyanion, for comparison. Films were deposited on glass slides by dipping them alternatively in aqueous solutions of the cation and the polyanion. UV-visible spectra indicate dye aggregation and suggest the formation of an inclusion complex of the dye with the cyclodextrin, thus isolating the chromophores. 

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