Enzymes hydrolytic activity

Inspired by the many hydrolytically-active metallo enzymes encountered in nature, extensive studies have been performed on so-called metallo micelles. These investigations usually focus on mixed micelles of a common surfactant together with a special chelating surfactant that exhibits a high affinity for transition-metal ions. These aggregates can have remarkable catalytic effects on the hydrolysis of activated carboxylic acid esters, phosphate esters and amides. In these reactions the exact role of the metal ion is not clear and may vary from one system to another. However, there are strong indications that the major function of the metal ion is the coordination of hydroxide anion in the Stem region of the micelle where it is in the proximity of the micelle-bound substrate. The first report of catalysis of a hydrolysis reaction by me tall omi cell es stems from 1978. In the years that... 

The transformations described thus far were catalyzed by enzymes in their traditional hydrolytic mode. More recent developments in the area of enzymatic catalysis in nonaqueous media (11,16,33—35) have significantly broadened the repertoire of hydrolytic enzymes. The acyl—enzyme intermediate formed in the first step of the reaction via acylation of the enzyme s active site nucleophile can be deacylated in the absence of water by a number of... 

Type II restriction enzymes have received widespread application in the cloning and sequencing of DNA molecules. Their hydrolytic activity is not ATP-depen-dent, and they do not modify DNA by methylation or other means. Most importantly, they cut DNA within or near particular nucleotide sequences that they specifically recognize. These recognition sequences are typically four or six nucleotides in length and have a twofold axis of symmetry. For example, E. coU has a restriction enzyme, coRI, that recognizes the hexanucleotide sequence GAATTC ... 

This model clearly shows that the catalytic machinery involves a dyad of histidine and aspartate together with the oxyanion hole. Hence, it does not involve serine, which is the key amino acid in the hydrolytic activity of lipases, and, together with aspartate and histidine, constitutes the active site catalytic triad. This has been confirmed by constructing a mutant in which serine was replaced with alanine (Serl05Ala), and finding that it catalyzes the Michael additions even more efficiently than the wild-type enzyme (an example of induced catalytic promiscuity ) [105]. 

Although hydrolytic enzymes, esterases and amidases, are named after their major substrates, the same enzyme can often hydrolyze esters, thioesters, and amides therefore, the differentiation between esterases and amidases is sometimes artificial. The highest hydrolytic activity is in the liver, but the enzyme pseudocholinesterase is found in the serum. Gut bacteria also contain hydrolytic enzymes. 

The physiological functions of carboxylesterases are still partly obscure but these enzymes are probably essential, since their genetic codes have been preserved throughout evolution [84] [96], There is some evidence that microsomal carboxylesterases play an important role in lipid metabolism in the endoplasmic reticulum. Indeed, they are able to hydrolyze acylcamitines, pal-mitoyl-CoA, and mono- and diacylglycerols [74a] [77] [97]. It has been speculated that these hydrolytic activities may facilitate the transfer of fatty acids across the endoplasmic reticulum and/or prevent the accumulation of mem-branolytic natural detergents such as carnitine esters and lysophospholipids. Plasma esterases are possibly also involved in fat absorption. In the rat, an increase in dietary fats was associated with a pronounced increase in the activity of ESI. In the mouse, the infusion of lipids into the duodenum decreased ESI levels in both lymph and serum, whereas an increase in ES2 levels was observed. In the lymph, the levels of ES2 paralleled triglyceride concentrations [92] [98],... 

The finding that the hydrolytic activity of the enzyme is retained after replacement of a tyrosine residue by phenylalanyl challenges the notion that a tyrosine acts as a general acid catalyst in peptide hydrolysis. It has been suggested that either the protonated Glu270 moiety or the zinc-water complex could perform the proton transfer [77]. 

Semm albumin is not an enzyme but a transport protein, yet it has demonstrated hydrolytic activity against a variety of xenobiotic substrates. This este-rase-like activity has been known for years, but there is still confusion in the literature regarding its nature and mechanism. Indeed, it was not clear whether this activity is intrinsic to the albumin molecule or results from contamination of albumin preparations by one or more hydrolytic enzymes. More-recent studies with highly purified human serum albumin (HSA) have confirmed that the protein has an intrinsic esterase activity toward several substrates, but that activity due to contaminants and particularly semm cholinesterase is involved... 

A variety of hydrolases catalyze the hydrolysis of acetylsalicylic acid. In humans, high activities have been seen with membrane-bound and cytosolic carboxylesterases (EC 3.1.1.1), plasma cholinesterase (EC 3.1.1.8), and red blood cell arylesterases (EC 3.1.1.2), whereas nonenzymatic hydrolysis appears to contribute to a small percentage of the total salicylic acid formed [76a] [82], A solution of serum albumin also displayed weak hydrolytic activity toward the drug, but, under the conditions of the study, binding to serum albumin decreased chemical hydrolysis at 37° and pH 7.4 from tm 12 1 h when unbound to 27 3 h for the fully bound drug [83], In contrast, binding to serum albumin increased by >50% the rate of carboxylesterase-catalyzed hydrolysis, as seen in buffers containing the hydrolase with or without albumin. It has been postulated that either bound acetylsalicylic acid is more susceptible to enzyme hydrolysis, or the protein directly activates the enzyme. 

Like in Chapt. 7, we begin the discussion with acetates, since acetic acid is the simplest nontoxic acyl group, formic acid being less innocuous. An informative study was carried out to compare the kinetics of hydrolysis of two types of corticosteroid esters, namely methyl steroid-21-oates (which are active per se) and acetyl steroid-21-ols (which are prodrugs), as exemplified by methyl prednisolonate (8.69) and prednisolone-21-acetate (8.70), respectively [89]. In the presence of rat liver microsomes, the rate of hydrolytic inactivation of methyl steroid-21-oates was much slower than the rate of hydrolytic activation of acetyl steroid-21-ols. Thus, while the Km values were ca. 0.1 -0.3 mM for all substrates, the acetic acid ester prodrugs and the methyl ester drugs had Vmax values of ca. 20 and 0.15 nmol min-1 mg-1, respectively. It can be postulated that the observed rates of hydrolysis were determined by the acyl moiety, in other words by the liberation of the carboxylic acid from the acyl-enzyme intermediate (see Chapt. 3). 

Enteric bacterial pathogens must maneuver through a lengthy stretch of hazardous terrain before they reach their intended target or infection site within a host. Initially, they must tolerate salivary enzymes having various hydrolytic activities in the mouth, followed by exposure to shedded epithelial cells in the esophagus that may prevent local bacterial adherence (Pearson and Brownlee, 2005). In the stomach, bacteria must endure another severe environment created by the secretion of digestive enzymes and hydrochloric acid (up to 0.1 M concentration and a pH as low as 1.0). Once bacteria reach the intestines, they then encoimter mechanical. 

The hydrolytic activities of the intact enzymes were comparable, but CBH I was much more sensitive to product (cellobiose) inhibition. Both core enzymes exhibited a strongly reduced activity (50-90%) which was correlated with the absence of the binding domain and their consequent lower binding capacity on Avicel. The activities of CBH I and Core I on amorphous cellulose were, however, comparable. 

Proteases have received less attention than lipases, but in one of the earliest papers on biocatalysis in ionic liquids it was noted that the activity loss of thermo-lysin during preincubation proceeded much more slowly in [BMIm][PF6] than in ethyl acetate [8]. The storage stability of a-chymotrypsin in the ionic liquid [EMIm][ Tf2N] was compared with that in water, 3 M sorbitol, and 1-propanol. The residual hydrolytic activity (after dilution with aqueous buffer) was measured vs time, and structural changes were monitored by fluorescence and CD spectroscopy as well as DSC [98]. The enzyme s life-time in [EMIm][ Tf2N] at 30°C was more than twice that in 3 M sorbitol, six times as long as that in water, and 96 times as long as that in 1-propanol. 

A study on tire storage stability of penicillin G in milk showed that about 60% could be destroyed within 48 h at 2 C, while 75% could be destroyed at 22 C (22). The loss of penicillin G was attributed to the hydrolytic activity of tlie enzyme -lactamase produced by both gram-negative and gram-positive bacteria of the raw milk. This was confirmed by analogous experimentation with UHT milk, in which penicillin G did not show any decrease under mentioned storage conditions. 

The fatty acid synthases of yeast and of vertebrates are also multienzyme complexes, and their integration is even more complete than in E. coli and plants. In yeast, the seven distinct active sites reside in two large, multifunctional polypeptides, with three activities on the a subunit and four on the /3 subunit. In vertebrates, a single large polypeptide (Afr 240,000) contains all seven enzymatic activities as well as a hydrolytic activity that cleaves the finished fatty acid from the ACP-like part of the enzyme complex. The vertebrate enzyme functions as a dimer (Afr 480,000) in which the two identical subunits lie head-to-tail. The subunits appear to function independently. When all the active sites in one... 

---