Bacteria sulfides

Arsenic is another element with different bioavailabiUty in its different redox states. Arsenic is not known to be an essential nutrient for eukaryotes, but arsenate (As(V)) and arsenite (As(III)) are toxic, with the latter being rather more so, at least to mammals. Nevertheless, some microorganisms grow at the expense of reducing arsenate to arsenite (81), while others are able to reduce these species to more reduced forms. In this case it is known that the element can be immobilized as an insoluble polymetallic sulfide by sulfate reducing bacteria, presumably adventitiously due to the production of hydrogen sulfide (82). Indeed many contaminant metal and metalloid ions can be immobilized as metal sulfides by sulfate reducing bacteria. 

Water Groundwater can be treated in anaerobic bioreactors that encourage the growth of sulfate reducing bacteria, where the metals are reduced to insoluble sulfides, and concentrated in the sludge. For example, such a system is in use to decontaminate a zinc smelter site in the Netherlands (95). 

Bacterial leaching is another example of oxidizing dissolution whereby specific bacteria either directiy attack the sulfide mineral or indirectiy enhance the regeneration of the oxidant. 

Various patents (22—24) have been issued claiming the use of tetrakis(hydroxymethyl)phosphonium sulfate in, for example, water treating, pharmaceuticals (qv), and in the oil industry where this compound shows exceptional activity toward the sulfate-reducing bacteria that are a primary cause of hydrogen sulfide formation and consequent problems associated with souring and corrosion (25). 

Health nd SMety Factors. The lowest pubhshed human oral toxic dose is 430 mg/kg, causing nervous system disturbances and gastrointestinal symptoms. The LD q (rat, oral) is 750 mg/kg (183). Thiocyanates are destroyed readily by soil bacteria and by biological treatment systems in which the organisms become acclimatized to thiocyanate. Pyrolysis products and combustion products can include toxic hydrogen cyanide, hydrogen sulfide, sulfur oxides, and nitrogen oxides. 

NKK s Bio-SR process is another iron-based redox process which instead of chelates, uses Thiobacillusferroidans )2iQ. - 2i to regenerate the solution (9). This process absorbs hydrogen sulfide from a gas stream into a ferric sulfate solution. The solution reacts with the hydrogen sulfide to produce elemental sulfur and ferrous sulfate. The sulfur is separated via mechanical means, such as filtering. The solution is regenerated to the active ferric form by the bacteria. 

The manner in which many of these bacteria cany on their chemical processes is qmte comphcated and in some cases not fuUy understood. The role of sulfate-reducing bacteria (anaerobic) in promoting corrosion has been extensively investigated. The sulfates in shghtly acid to alkaline (pH 6 to 9) soils are reduced by these bacteria to form calcium sulfide and hydrogen sulfide. When these compounds come in contact with underground iron pipes, conversion of the iron to iron sulfide occurs. As these bacieria thrive under these conditions, they will continue to promote this reaction until failure of the pipe occurs. 

Thiobacillus thiooxidans is an aerobic organism that oxidizes various sulfur-containing compounds to form sulfuric acid. These bacteria are sometimes found near the tops of tubercles (see Chap. 3, Tubercu-lation ). There is a symbiotic relationship between Thiobacillus and sulfate reducers Thiobacillus oxidizes sulfide to sulfate, whereas the sulfate reducers convert sulfide to sulfate. It is unclear to what extent Thiobacillus directly influences corrosion processes inside tubercles. It is more likely that they indirectly increase corrosion by accelerating sulfate-reducer activity deep in the tubercles. 

Scale deposits create conditions for concentration-cell corrosion as they do not form uniformly over the metal surface. Sulfate-reducing bacteria thrive under these deposits, producing hydrogen sulfide and, consequently, increasing the rate of corrosion. Due to the following factors, the drilling fluid environment is ideal for scale deposition [189]. These factors are as follows ... 

These microorganisms become a problem when their numbers are large enough to produce corrosives such as carbon dioxide and hydrogen sulfide. Pseudomonas, Bacillus and Flavobacterium are examples of slime-forming bacteria. 

Light, sandy, well-drained soil of high electrical resistivity is low in corrosivity and coated steel or bare stainless steels can be employed. It is unlikely that the whole pipe run would be in the same type of soil. In heavier or damp soils, or where the quality of back filling cannot be guaranteed, there are two major corrosion risks. Steel, copper alloys and most stainless steels are susceptible to sulfide attack brought about by the action of sulfate-reducing bacteria in the soil. SRB are ubiquitous but thrive particularly well in the anaerobic conditions which persist in compacted soil, especially clay. The mechanism of corrosion where SRB are involved is described in Section... 

Sulfur is most commonly encountered in biological molecules either in compounds called thiols, which have a sulfur atom bonded to one hydrogen and one carbon, or in sulfides, which have a sulfur atom bonded to two carbons. Produced by some bacteria, methanethiol (CH3SH) is the simplest example of a thiol, and dimethyl sulfide [(ChP S l is the simplest example of a sulfide. Both can be described by approximate sp3 hybridization around sulfur, although both have significant deviation from the 109.5° tetrahedral angle. 

Dissimilatory sulfate reducers such as Desul-fovibrio derive their energy from the anaerobic oxidation of organic compounds such as lactic acid and acetic acid. Sulfate is reduced and large amounts of hydrogen sulfide are generated in this process. The black sediments of aquatic habitats that smell of sulfide are due to the activities of these bacteria. The black coloration is caused by the formation of metal sulfides, primarily iron sulfide. These bacteria are especially important in marine habitats because of the high concentrations of sulfate that exists there. 

Yagi laid the foundation for the enzymology of CODH when he discovered an enzymatic activity in sulfate-reducing bacteria that oxidizes CO to CO2 (118). Twenty-five years later, the first CODH was purified to homogeneity (119, 120). The homogeneous C. thermo-aceticum CODH was shown to contain 2 mol of nickel, 12 iron, 1 zinc, and 14 acid-labile inorganic sulfide per afS dimeric unit (120). 

ROSS z M, o gara e A, HILL D J, SLEIGHTHOLME H V, MASLIN D J (2001) Antimicrobial properties of garlic oil against human enteric bacteria evaluation of methodologies and comparisons with garlic oil sulfides and garlic powder. Appl Environ Microbiol. 67 475-80. 

---