API 3000 triple quadrupole mass spectrometer

Sample analysis was performed by using an Applied Biosystems (Foster City, CA) API 3000 triple quadrupole mass spectrometer equipped with a TurboIonSpray source and an Agilent 1100 capillary HPLC system (Palo Alto, CA). The capillary HPLC system included a binary capillary pump with an active micro flow rate control system, an online degasser, and a microplate autosampler. The analytical column was a 300 pm I.D.x 150 mm Zorbax C18 Stablebond capillary column (pore size 100 A and particle size 3.5 pm). The injection volume was 5 pL, and a needle ejection rate of 40 pL/min was used. The pLC flow rate was 6 pL/min. In order to minimize dead volume before the column, the autosampler was programmed to bypass the 8 pL sample loop 1.5 min after injection. The mobile phase consisted of (A) 2 mM ammonium acetate (adjusted to pH 3.2 with formic acid) in 10 90 acetonitrile-water, and (B) 2 mM ammonium acetate in 90 10 acetonitrile-water. The percentage of mobile phase B was held at 32 % for the first minute, increased to 80 % over 8 min, and then increased tol00% over the following 1 min. 

Instrumentation LC/MS/MS analysis is carried out on a Perkin-Elmer SCIEX API 3000 triple quadrupole mass spectrometer (Toronto, Canada) interfaced to an HPLC system consisting of a Perkin-Elmer Series 200... 

MS Detection The experiments were conducted on an API 3000 triple quadrupole mass spectrometer (Applied Biosystems, Foster City, CA) equipped with its Turbolonspray interface operated... 

Mass Spectrometry and Other Analytical Procedures. Liquid chromatography electrospray mass spectrometry (LC-ESMS) was performed on approximately 1 pg protein samples with a Perkin Elmer Sciex API-300 triple quadrupole mass spectrometer fitted with an articulated ion spray source and set to scan over a range of 400-3000... 

The LIT introduced as part of a triple-quadrupole mass spectrometer is marketed under the name QTRAP. As shown in Fig. 1.26, the ion path and the differentially pumped region of QTRAP are similar to a triple quadrupole (API 3000, API 4000, and API 5000), except the Q3 is capable of functioning as a linear trap. QTRAP and its capabilities are described in detail in Chapter 3. Table 1.2 compares some of the advantages and limitations of QTRAP and LTQ mass spectrometers. 

Figure 1.14. MRM chromatograms of SCH 29851 (383.0. 337.0) and SCH 34117 (311.1 259.1) obtained using Sciex API 3000 (triple-stage quadrupole) and Sciex QSTAR pulsar (Q-TOF). Comparison of MRM chromatograms of SCH 29851 and SCH 34117 obtained at the LOQ (1 ng/mL) using the API 3000 mass spectrometer with those from the Q-TOF mass spectrometer indicated that the S/N ratio is at least 10-20 times better on the API 3000 mass spectrometer. However, the MRM chromatograms from the API 3000 mass spectrometer do not provide the option to further examine the MS/MS spectra whereas the full-scan MS/MS spectra from a Q-TOF based quantitative bioanalysis assay allows one to easily eliminate any questions about false-positive data. (Rephnted with permission from Yang et a ., 2001b.)...

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