Yeasts problems

Microbiological Stabilization. Dry North Coast white wines, because of normal (11-14 percent) levels of ethanol, relatively high acids, and low pH, have few potential yeast problems.Total removal of yeast after fermentation is usually not an objective of the handling of these wines. 

S. cerevisiae is produced by fed-batch processes in which molasses supplemented with sources of nitrogen and phosphoms, such as ammonia, ammonium sulfate, ammonium phosphate, and phosphoric acid, are fed incrementally to meet nutritional requirements of the yeast during growth. Large (150 to 300 m ) total volume aerated fermentors provided with internal coils for cooling water are employed in these processes (5). Substrates and nutrients ate sterilized in a heat exchanger and then fed to a cleaned—sanitized fermentor to minimize contamination problems. 

Yeast. The advantages of expression in yeast include potentially high level production of proteins, the abiUty to have expressed proteins secreted into the media for ease of purification, and relatively low cost, easy scale-up. A disadvantage is that plasmid instabiUty may be a problem which can lead to low product yield. Whereas post-translational modification occurs in yeast, proteins are quite often hyperglycosylated. This is generally a problem with expression in Saccharomyces cerevisiae but not for the more recently used yeast host Pichiapastoris (25) (see Yeasts). 

The presence of nucleic acids ia yeast is oae of the maia problems with their use ia human foods. Other animals metabolize uric acid to aHantoia, which is excreted ia the uriae. Purines iagested by humans and some other primates are metabolized to uric acid, which may precipitate out ia tissue to cause gout (37). The daily human diet should contain no more than about 2 g of nucleic acid, which limits yeast iatake to a maximum of 20 g. Thus, the use of higher concentrations of yeast proteia ia human food requires removal of the nucleic acids. Unfortunately, yields of proteia from extracts treated as described are low, and the cost of the proteia may more than double. 

Fermentation Processes. The efficient production of penicillin, yeasts, and single-ceUed protein by fermentation requires defoamers to control gas evolution during the reaction. Animal fats such as lard [61789-99-9] were formerly used as a combined defoamer and nutrient, but now more effective proprietary products are usually employed. Defoamer appHcation technology has also improved. For example, in modem yeast production faciHties, the defoamers are introduced by means of automatic electrode-activated devices. One concern in the use of defoamers in fermentation processes is the potential fouHng of membranes during downstream ultrafiltration (qv). SiHcone antifoams (43,44) seem less troubled by this problem than other materials. 

One of the problems facing the use of n-paraffms as a substrate for Candida yeast is the presence of residual hydrocarbons in the product. ... 

In general, fungal mycelia are filtered relatively easily, because mycelia filter cake has sufficiently large porosity. Yeast and bacteiia are much more difficult to handle because of thefr small size. Alternative filtration methods, which eliminate the filter cake, are becoming more acceptable for bacterial and yeast separation. Micro-filtration is achieved by developing large cross-flow fluid velocities across the filter surface while the velocity vector normal to the surface is relatively small. Build up of filter cake and problems of high cake resistance are therefore prevented. Micro-filtration is not discussed in this section. 

The two-dimensional gel of the yeast extract is shown in Figure 5.18 and clearly illustrates the complexity of the analytical problem. 

Whole cells are grown for a variety of reasons. The cells may perform a desired transformation of the substrate, e.g., wastewater treatment the cells themselves may be the desired produce, e.g., yeast production or the cells may produce a desired product, e.g., penicillin. In the later case, the desired product may be excreted, as for the penicillin example, and recovered in relatively simple fashion. If the desired product is retained within the cell walls, it is necessary to lyse (rupture) the cells and recover the product from a complex mixture of cellular proteins. This approach is often needed for therapeutic proteins that are created by recombinant DNA technology. The resulting separation problem is one of the more challenging aspects of biochemical engineering. However, culture of the cells can be quite difficult experimentally and is even more demanding theoretically. 

An enzymatic process using partially purified pyruvate decarboxylase (PDC) with added pyruvate overcomes the problems of benzyl alcohol formation and limiting availability of pyruvate [3]. As a result increased concentrations, yields and productivities of PAC were achieved with concentrations of PAC in excess of 50 g f (330 mM) in 28 h and yields on benzaldehyde above 95% theoretical [4-6]. Screening of a wide range of bacteria, yeasts and other fungi as potential sources of stable, high activity PDC for production of PAC confirmed a strain of the yeast Candida utilis as the most suitable source of PDC [7]. 

A solution to the problem of introns is to isolate mRNA extracted from the human pancreas cells that make insulin. These cells are rich in insulin mRNA from which introns have already been spliced out. Using the enzyme reverse transcriptase it is possible to convert this spliced mRNA into a DNA copy. This copy DNA (cDNA), which carries the uninterrupted genetic information for insulin can be cloned. Although yeast cells (Saccharomyces) can splice out introns it is normal practice to eliminate them anyway by cDNA cloning. 

The genome of the Helicobacterpylori bacterium is 1.6 million base pairs in size and encodes 1590 ORFs (Tomb et al., 1997). The comprehensive two-hybrid library screen performed with these ORFs differs from the yeast experiments described above in that the Gal4 activation domain library used consisted of over ten million random genomic fragments (Rain et al., 2001). Thus, the potential problem of full-size ORFs masking protein-protein interactions is reduced. A total of 261 ORFs were fused to the Gal4 DNA binding domain to create a set of baits. These ORFs... 

Over a long time period it may well not be possible to duplicate library cell culture conditions. What happens when the lot of media used in the final culture step prior to pyrolysis has been consumed Can culture media suppliers assure nutritional identity between batches Media types for growth of fastidious strains invariably include natural products such as brewer s yeast, tryptic soy, serum, egg, chocolate, and/or sheep blood. Trace components in natural products cannot be controlled to assure an infinite, invariable supply. The microtiter plate wells used here do not hold much media. Even so, the day will come when all media supplies are consumed and a change in batch is unavoidable. When that happens, if there were no effective way to compensate spectra for the resulting distortions, it would be necessary to re-culture and re-analyze replicates for every strain in the reference library. Until recently the potential for obsolescence was a major disincentive for developing PyMS spectral libraries of bacteria. Why this is no longer an insurmountable problem is discussed in the next section. 

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