Soret bands

Soret band of the macrocycle, a ti to tt transition, is excited instead. It has been found that the vinyl groups do not participate in the conjugated system [4]. This is based on the fact that the vinyl C=C stretch does not... 

Figure C3.1.7. Time-resolved optical absorjDtion data for the Soret band of photo lysed haemoglobin-CO showing six first-order (or pseudo-first-order) relaxation phases, I-VI, on a logaritlimic time scale extending from nanoseconds to seconds. Relaxations correspond to geminate and diffusive CO rebinding and to intramolecular relaxations of tertiary and quaternary protein stmcture. (From Goldbeck R A, Paquette S J, Bjorling S C and Kliger D S 1996 Biochemistry 35 8628-39.)...

Iron Porphyrins. Porphyrias (15—17) are aromatic cycHc compouads that coasist of four pyrrole units linked at the a-positions by methine carbons. The extended TT-systems of these compounds give rise to intense absorption bands in the uv/vis region of the spectmm. The most intense absorption, which is called the Soret band, falls neat 400 nm and has 10. The TT-system is also responsible for the notable ring current effect observed in H-nmr spectra, the preference for planar conformations, the prevalence of electrophilic substitution reactions, and the redox chemistry of these compounds. Porphyrins obtained from natural sources have a variety of peripheral substituents and substitution patterns. Two important types of synthetic porphyrins are the meso-tetraaryl porphyrins, such as 5,10,15,20-tetraphenylporphine [917-23-7] (H2(TPP)) (7) and P-octaalkylporphyrins, such as 2,3,7,8,12,13,17,18-octaethylporphine [2683-82-1] (H2(OEP)) (8). Both types can be prepared by condensation of pyrroles and aldehydes (qv). 

The Ni and V concentrated into the vacuum resid appear to occur in two forms. Erom 10 to 14% of each of these two metals can be distilled in the 565—705°C boiling range, where they exhibit the strong visible Soret bands associated with the porphyrin stmcture. This tetrapyrrole stmcture (48,49), possibly derived from ancient chlorophyll, has been confirmed by a variety of analytical techniques. 

Chlorophylls c have characteristic bands between 578 and 630 nm and between 443 and 450 mn that correspond to the Q-band and the Soret band, respectively. ... 

The spectral characteristics of bacteriochlorophyUs differ from each other, depending on their peripheral side chains, and the Q band varies between 646 and 795 nm, while the Soret band ranges between 365 and 456 mn. BacteriochlorophyUs absorb in the infrared, in addition to the blue part of the spectrum. ... 

Comparative studies of the widely employed spectrophotometric readings at the Soret and Q bands (405 and 630 nm, respectively) and the elemental analysis of copper and nitrogen showed that the spectrophotometric assay based only on the Soret band can overestimate the purity of a preparation. Erroneous data were attributed to an increase in absorptivity at the Soret band when other colored compounds like metal-free analogs and carotenoids are present. Indeed, copper-free chlorin e6 exhibits a specific absorbance 3.6 times greater than that of its coppered counterpart. Therefore, measurements at the Q band (630 mn) and the establishment of the S Q ratio are preferred. 

However, it was pointed out that two other observations are out of line with the iron(I) formulation and more consistent with an iron(II)-porphyrin radical anion [290] (1) the low-intensity red-shifted Soret band in the UV-VIS spectrum with broad maxima in the a,(3-region compared to, for instance, Fe(TPP) in THF, is typical of a porphyrin radical, and (2) the bond lengths of the porphyrin core indicate population of the (antibonding) LUMO of the ligand (i.e., the presence of an extra electron in the re-system). The presence of porphyrin radical character in the electronic ground state was also inferred from the paramagnetic NMR-shifts of the pyrrole protons at the meso and p-carbon atoms [291]. 

The second reduction step of Fe(II)(TPP) yields an extremely air-sensitive green product which can be assigned the formula [Fe(I)(TPP) ] because of the red shift of the Soret band in the UV-VIS spectrum. The pure material is diamagnetic (S = 0) but this does not allow one to distinguish between the three possible descriptions as an iron(O) / -porpyhrin, a spin-coupled S = 1/2 iron(I)-porphyrin... 

FIG. 16 Photocurrent spectra corresponding to the photo-oxidation of DCMFc by ZnYPPC" at the water-DCE interface under chopped illumination and lock-in detection. The main features of the spectra coincide with the onset of the Soret band and the Q-bands of the porphyrin ring. (From Ref. 73. Reproduced by permission of the Royal Society of Chemistry.)... 

While the control resins were deep red in color due to the presence of soluble porphyrin complexes, the methacrylate resins obtained after removal of the polyethylene-supported catalysts varied from light yellow to nearly water-white (APHA < 25). UV-Vis spectrophotometric analysis of the yellow resins indicated an absorption signal for the cobalt porphyrin complex Soret band (wavelength of cobalt(ll) porphyrin species appears at -415 nm free porphyrin ligand is formd at -423 tun). Resin samples that visttally appear as water-white show little or no porphyrin species present in the spectrum. Measured catalyst activity and PDl of the polyethylene-supported porphyrin complexes are in the expected range for soluble porphyrin CCT catalysts (PDl = M /Mn - 1.2- 2.0)." The screening resrrlts clearly... 

Sanders (14) has exploited the strong and selective coordination of phosphine donor groups to Ru(II) to construct hetero-dimetallic porphyrin dimers (17, Fig. 5). An alkyne-phosphine moiety introduced on the periphery of a free base or metalloporphyrin (M = Zn or Ni) spontaneously coordinates to a Ru(II)(CO) porphyrin when the two porphyrins are mixed in a 1 1 ratio. Coordination is characterized by a downfield shift of the 31P resonance (A<531P = 19 ppm). There is no evidence of self-coordination of the zinc porphyrin at 10 6 m in toluene, there is no shift in the Soret band in the UV-Vis absorption spectrum. The Ni-Ru dimer was observed by MALDI-TOF mass spectrometry. Heating the Ru(II)CO porphyrin with 2 equivalents of the phosphine porphyrins led to quantitative formation of trimeric assemblies. 

LDMS is particularly well suited for the analysis of porphyrins.35-39 The heme molecule—a 22 rc-electron conjugated protoporphyrin system (Figure 8.1)—is an efficient photo-absorber in the visible and near UV (with an absorption maximum—the Soret band—near 400nm). This feature, concurrently with its low ionization potential, warrants that direct LDMS will possess extremely low limits for heme detection. The uses of IR or UV LDMS for structural characterization of natural porphyrins and their metabolites, synthetic monomeric porphyrins (e.g., used in photodynamic therapy), porphyrin polymers, and multimeric arrays, have been well documented.41148 In addition fast atom bombardment MS has been used to characterize purified hemozoin, isolated from the spleens and livers of Plasmodium yoelii infected mice.49... 

The biochemical activity and accessibility of biomolecule-intercalated AMP clays to small molecules was retained in the hybrid nanocomposites. For example, the absorption spectrum of the intercalated Mb-AMP nanocomposite showed a characteristic soret band at 408 nm associated with the intact prosthetic heme group of the oxidised protein (Fe(III), met-myoglobin) (Figure 8.9). Treatment of Mb with sodium dithionite solution resulted in a red shift of the soret band from 408 to 427 nm, consistent with the formation of intercalated deoxy-Mb. Reversible binding of CO under argon to the deoxy-Mb-AMP lamellar nanocomposite was demonstrated by a shift in the soret band from 427 to 422 nm. Subsequent dissociation of CO from the heme centre due to competitive 02 binding shifted the soret band to 416nm on formation of intercalated oxy-Mb. 

Fig. 8.9 UV—Vis spectra of intercalated biomolecules assembled AMP. Soret band absorptions for (A) oxidized myoglobin (met-Mb) and after dithionite reduction (deoxy-Mb), and (B) after CO (CO-Mb) and 02 bindingto intercalated deoxy-Mb.

Phototactic action spectra of Phormidium autumnale and Phormidium uncinatum, measured by Nultsch86>89), show prominent maxima in the absorption range of C-phycoerythrin and smaller, but distinct, peaks in the absorption range of C-phyco-cyanin. Red light absorbed by chlorophyll a is not active, while in the blue range absorbedby the Soret band, the action spectrum shows aminimum(Fig. 6). Nultsch87) concluded that biliproteins are photoreceptors of phototaxis, but independently of the photosynthetic electron transport and phosphorylation. 

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