Proteomics proteolytic degradation

The results for bacterial whole-cell analysis described here establish the utility of MALDI-FTMS for mass spectral analysis of whole-cell bacteria and (potentially) more complex single-celled organisms. The use of MALDI-measured accurate mass values combined with mass defect plots is rapid, accurate, and simpler in sample preparation then conventional liquid chromatographic methods for bacterial lipid analysis. Intact cell MALDI-FTMS bacterial lipid characterization complements the use of proteomics profiling by mass spectrometry because it relies on accurate mass measurements of chemical species that are not subject to posttranslational modification or proteolytic degradation. 

In the quest to find other plants that are suitable as bioreactors, various monocoty-ledonous and dicotyledonous species have been tested. These include corn [16], rice and wheat [17], alfalfa [18], potato [19, 20], oilseed rape [21], pea [22], tomato [23] and soybean [24]. The major advantage of cereal crops is that recombinant proteins can be directed to accumulate in seeds, which are evolutionar specialized for storage and thus protect proteins from proteolytic degradation. Recombinant proteins are reported to remain stable in seeds for up to five months at room temperature [17] and for at least three years at refrigerator temperature without significant loss of activity [25]. In addition, the seed proteome is less complex than the leaf proteome, which makes purification quicker and more economical [26]. 

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