Intermolecular interaction perturbative analysis

K. Szalewicz and B. Jeziorski. Symmetry adapted, double perturbation analysis of intramolecular correlation effects in weak intermolecular interactions. Molec. Phys., 38 191, 1979. 

The most extensive analysis of the nature of intermolecular interaction components in hydrogen-bonded complexes of nucleic acid bases is that performed by Toczylowski et al. [26], The authors presented the results of calculations obtained on the basis of the intermolecular Mpller-Plesset perturbation theory using... 

The first chapter by Moszyliski presents in a systematic and comprehensive manner the current state-of-the-art theory of intermolecular interactions. Numerous examples illustrate how theoreticians and experimentalists working in tandem may gather valuable quantitative results related to intermolecular interactions, like accurate potential functions, interaction-induced properties, spectra and collisional characteristics or dielectric, refractive or thermodynamic properties of bulk phases. On the other hand the most advanced Symmetry Adapted Perturbation Theory (SAPT) enables validation of more approximate variation-pertubation models which could be applied to the analysis of specific interactions in much larger molecular systems, for example enzyme-drug interactions discussed in Chapter VIII by Berlicki et al. 

Intermolecular electrostatic interactions are often the target of perturbation analysis on the basis of simulation data (Hummer et a/., 1998fo). We give here... 

We are examining the question of various rigorous perturbation expressions (91) for intermolecular interactions and are currently doing the analysis and writing a program to calculate these (92). We shall test the validity of this latter procedure by comparison with accurate ab-initio supermolecule calculations for smaller test systems. 

The well-established perturbation theory of intermolecular interaction [53 59] can be applied to hydrogen-bonded systems in combination with the frozen molecule approximation, when the interaction is either sufficiently weak [60 62], or when the interaction is treated at a more qualitative level. When the interaction becomes larger, structural relaxations become sizable. Then the more usual approach to treat the hydrogen-bonded complex or cluster as a supermolecule becomes more practical and also more appropriate. However, also in this case, the detailed analysis of the interaction energy is often done with the aid of different variants of energy partitioning techniques [63,64] which closely follow the lines of intermolecular perturbation theory. 

On the basis of a sound analysis of intermolecular interactions, performed by means of a quantum perturbational approach, Claverie derived a force field that could suitably represent intermolecular interactions. The electrostatic interactions are described by means of a distributed multipole analysis, and induction effects are taken into account. The force field sum of interactions between fragments completed ab initio (SIBFA) originated from this study and was subsequently applied successfully to many biophysical problems. 

On the other hand, the analysis of experimental shockwave data for water has shown (Ree 1982) that at the limit of high temperatures and pressures intermolecular interactions of water become simpler. In this case, it becomes even possible to use a spherically-symmetric model potential for the calculations of water properties either from computer simulations (Belonoshko and Saxena 1991, 1992) or from thermodynamic perturbation theory in a way similar to simple liquids (Hansen and McDonald 1986). However, such simplifications exclude the possibility of understanding many important and complex phenomena in aqueous fluids on a true molecular level, which is, actually, the strongest advantage and the main objective of molecular computer simulations. 

Cambridge Structural Database Crystal Structure Calculations 1 Intermolecular Interactions by Perturbation Theory X-Ray Crystallographic Analysis and Semiempirical Computations. 

Atoms in Molecules Electron Transfer Calculations Electronic Wavefunctions Analysis Hyperconjugation Intermolecular Interactions by Perturbation Theory Localized MO SCF Methods Natural Orbitals NMR Chemical Shift Computation Ab Initio Rotational Barriers Barrier Origins Valence Bond Curve Crossing Models. 

Second-order perturbative analysis of (HF)2 shows the leading intermolecular interaction to be the expected delocalization from donor monomer... 

In order to leam more about the nature of the intermolecular forces we will start with partitioning of the total molecular energy, AE, into individual contri butions, which are as close as possible to those we defined in intermolecular perturbation theory. Attempts to split AE into suitable parts were undertaken independently by several groups 83-85>. The most detailed scheme of energy partitioning within the framework of MO theory was proposed by Morokuma 85> and his definitions are discussed here ). This analysis starts from antisymmetrized wave functions of the isolated molecules, a and 3, as well as from the complete Hamiltonian of the interacting complex AB. Four different approximative wave functions are used to describe the whole system ... 

Xantheas and co-workers [159,160] have incorporated polarization in a model scheme and have used that to provide a clear basis for the enhancement of water s dipole in ice. A model potential with polarization has been reported for the formaldehyde dimer [161]. It is an example of a carefully crafted potential, which is system-specific because of its application to pure liquid formaldehyde, but which has terms associated with properties and interaction elements as in the above models. As well, some of the earliest rigid-body DQMC work, which was by Sandler et al. [162] on the nitrogen-water cluster, used a potential expressed in terms of interaction elements derived from ab initio calculations with adjustment (morphing). Stone and co-workers have developed interaction potentials for HF clusters [163], water [164], and the CO dimer [165], which involve monomer electrical properties and terms derived from intermolecular perturbation theory treatment. SAPT has been used for constructing potentials that have enabled simulations of molecules in supercritical carbon dioxide [166]. There are, therefore, quite a number of models being put forth wherein electrical analysis and/or properties of the constituents play an essential role, and some where electrical analysis is used to understand property changes as well as the interaction energetics. 

As pointed out in Section IIB, it is possible to approach the lattice dynamics problem of a molecular crystal by choosing the cartesian displacement coordinates of the atoms as dynamical variables (Pawley, 1967). In this case, all vibrational degrees of freedom of the system are included, i.e., translational and librational lattice modes (external modes) as well as intramolecular vibrations perturbed by the solid (internal modes). It is then obviously necessary to include all intermolecular and intramolecular interactions in the potential function O. For the intramolecular part a force field derived from a molecular normal coordinate analysis is used. The force constants in such a case are calculated from the measured vibrational frequencies, The intermolecular part of O is usually expressed as a sum of terms, each representing the interaction between a pair of atoms on different molecules, as discussed in Section IIA. 

---