Fluorescence microscopy synthesis

The synthesis and characterization of a somatostatin receptor-specific peptide H2N-(DPhe)-cyclo[Cys-Phe-(D-Trp)-Lys-Thr-Cys]-Thr-OH, labeled with an indo-dicarbo- and an indotricarbocyanine dye at the V-terminal amino group were described in [34], The ability of these fluorescent contrast agents to target the somatostatin receptor was demonstrated by flow cytometry in vitro, wherein the indotricarbocyanine conjugate led to elevated cell-associated fluorescence on somatostatin receptor-expressing tumor cells. The intracellular localization was visualized using NIR fluorescence microscopy. 

The RNA molecules, ribosomal RNA (rRNA) and messenger RNA (mRNA) play key roles in the protein synthesis. The amount of RNA in individual cells or in a community may, therefore, be taken as an indicator of protein synthesis and, thus, microbial activity. The number of active cells can be detected by fluorescent in situ hybridization (FISH) (Amann et al. 1995). By this method, individual cells carrying high concentrations of rRNA, situated on ribosomes, are quantified by fluorescence microscopy. The amount of rRNA in a community can also be detected by Reverse Transcriptase Polymerase Chain Reaction (RT-PCR), where rRNA extracted from soil is detected by creating a DNA copy and separating by gel electrophoresis (Duineveld et al. 2001). 

Figure 9.17 Green fluorescent protein (GFP) synthesis in water-in-oil emulsion as visualized by fluorescence microscopy. (Adapted from Pietrini and Luisi, 2004). Shown are the compartments in which GFP has been expressed (green in the original), (a) Typical micrographs of the cell-free GFP synthesis in Span 80 (0.45% v/v)/Tween 80 (0.05% v/v)/aqueous solution (0.5% v/v) in mineral oil emulsion droplets, preparation at 4 °C incubation at 37°C (i) 0 min, (ii) 11 min, (iii) 23 min, (iv) 32 min, (v) 44 min, (vi) 57 min, (vii) 21 h. Negative control (viii) 0 min, (ix) 21 h. The bar represents 50 p.m. (b) Kinetics of the cell-free GFP synthesis in emulsion droplets, on average 10 droplets with diameters of 30-60 um are evaluated per time point, cell-free enhanced GFP synthesis in emulsion droplets (i, ii and iii are three independent experiments) and negative controi (iv and v are two independent experiments).

Method for synthesis of monodisperse spherical-like manganese carbonate (MnCOs) particles by colloidal aggregation process is developed. Hollow polyelectrolyte capsules have been prepared by means of layer-by-layer absorption of charged polyelectrolytes on microsized MnCOs particles with the subsequent decomposition of a micrometer nucleus. The use of inorganic templates is a way for clean capsules fabrication. The manganese carbonate particles and capsules obtained were investigated by SEM, SFM, XRD, and confocal fluorescent microscopy. 

Successful application of this experimental approach depends on several factors synthesis of high-quality hybridization probes, appropriate fixation of the sample, the hybridization procedure, and the fluorescence microscopy approach used to image the specimen. In adapting the technique of three-dimensional in situ hybridization to different organisms and tissue types, the simplest and most invariant aspect of the technology has proved to be the hybridization procedure. Probes must be developed on a custom basis to address the particular questions of the investigator, and equally crucially, fixation conditions need to be adapted with special attention to the physical attributes of the individual specimen. However, once appropriate preparation conditions are established for a particular type of sample, it has been unnecessary to reoptimize the basic hybridization protocol. We discuss each of these experimental issues separately below. 

The aqueous photochemistry of 2-oxooctanoic acid (a single-tailed surfactant) results in the synthesis of a double-tailed surfactant product followed by spontaneous self-assembly into vesicles. The photochemistry mechanism is detailed here, and the reaction products are identified using mass spectrometry. Then, the self-assembled vesicles are characterized using DLS, fluorescence microscopy, and NMR. ... 

Latt, S. A. Detection of DNA synthesis in interphase nuclei by fluorescence microscopy. J. Cell Biol. 1974,62,546-550. 

Verhaegh, N.A.M., and van Blaaderen, A. (1994) Dispersions of rhodamine-labeled silica spheres synthesis, characterization, and fluorescence confocal scanning laser microscopy. Langmuir 10, 1427-1438. 

A few examples to render tetrapyrrolic compounds less phototoxic can be found in the hterature. In one approach, carotenoid structures were employed for the synthesis of some carotenoporphyrin derivatives [92-94]. Figure 8 shows two stuctures by way of example. Due to similar photophysical properties of the two structural components, the excited triplet state of the porphyrin is quenched by the carotenoid moiety, thus inhibiting the formation of singlet oxygen, while its fluorescence capabilities are still preserved. Biodistribution studies revealed enhanced uptake into tumour tissue [39,93,95]. However, microscopy studies have shown that such compounds are associated with connective tissues in the tumors rather than with cancerous cells indicating low specificities for mahgnant transformation [96]. 

Pu reported the synthesis of axially chiral-conjugated polymer 82 bearing a chiral binaphthyl moiety in the main chain by the cross-coupling polymerization of chiral bifunctional boronic acid 80 with dibromide 81 (Equation (39)). The polymer is soluble in common organic solvents, such as THE, benzene, toluene, pyridine, chlorobenzene, dichloromethane, chloroform, and 1,2-dichloroethane. The polymer composed of racemic 80 was also synthesized, and the difference of characteristics was examined. Optically active polymer 82 was shown to enhance fluorescence quantum yield up to = 0.8 compared with the racemic 82 ( = 0.5). Morphologies of the optically active and racemic polymers were also compared with a systematic atomic-force microscopy (AEM). 

---