Flavonoids hydroxylases

Kaltenbach, M. et al., Flavonoid hydroxylase from Catharanthus roseus. cDNA, heterologous expression, enzyme properties and cell-type specific expression in plants. Plant J., 19, 183, 1999. 

Bogs J, Ebadi A, McDavid D, Robinson SP. 2006. Identification of the flavonoid hydroxylases from grapevine and their regulation during fruit development. Plant Physiol 140 279-291. 

Leonard E, Yan Y, Koffas MA. 2006b. Functional expression of a P450 flavonoid hydroxylase for the biosynthesis of plant-specific hydroxylated flavonols in Escherichia coli. Metab Eng 8 172-181. 

The flavonoid hydroxylases (F3 H, F3 ,5 H) and the phenylpropanoid enzyme cinnamate 4-hydroxylase (C4H) are cytochrome P-450s that are anchored to the cytoplasmic face of the ER.14 F3 H and F3 ,5 H add hydroxyl groups to the 3 and/or 5 of the B ring bringing about chemical and spectral diversity to the flavonoids. Dihydroflavonol 4-reductase (DFR) is the committed step to the production of the precursor of the colored compounds - the leucoanthocyanidins (Fig. 3.2). It is upon the reduction of the 4 keto of the C -ring by DFR (Fig. 3.1) and its further reduction by leucoanthocyanidin dioxygenase/anthocyanidin synthase (LDOX/AS) that the de-localization of the electrons necessary for the formation of the planar flavylium ion is permitted.2... 

Fig. 5 Scheme of the flavonoid pathway leading to synthesis of proanthocyanidins. The enzymes involved in the pathway are shown as follows CHS = chalcone synthase CHI = chalcone isomerase F3H = flavanone-3B-hydroxylase DFR = dihydroflavonol-4-reductase LDOX = leucoanthocynidin dioxygenase LAR = leucoanthocyanidin reductase ANR = anthocyanidin reductase adapted from [27] and [28]... 

Figure 5.4. Abbreviated scheme for biosynthesis of major flavonoid subclasses, showing the primary enzymes and substrates leading to different subclasses. Bold-faced, uppercase abbreviations refer to enzyme names, whereas substrate names are presented in lowercase letters. PAL, phenylalanine ammonia lyase C4H, cinnamate 4-hydroxylase 4CL, 4-coumarate CoA ligase CHS, chalcone synthase CHI, chalcone isomerase CHR, chalcone reductase IPS, isoflavone synthase F3H, flavonone 3-hydroxylase F3 H, flavonoid 3 -hydroxylase F3 5 H, flavonoid 3 5 -hydroxylase FNSI/II, flavone synthase DFR, dihydroflavonol 4-reductase FLS, flavonol synthase ANS, anthocyanidin synthase LAR, leucoanthocyanidin reductase ANR, anthocyanidin reductase UFGT, UDP-glucose flavonoid 3-O-glucosyltransferase. R3 = H or OH. R5 = H or OH. Glc = glucose. Please refer to text for more information.

Turnbull JJ, Nakajima J, Welford RW, Yamazaki M, Saito K and Schofield CJ. 2004. Mechanistic studies on three 2-oxoglutarate-dependent oxygenases of flavonoid biosynthesis anthocyanidin synthase, flavonol synthase, and flavanone 33-hydroxylase. J Biol Chem 279 1206-1216. 

Figure 6.1 Major branch pathways of flavonoid biosynthesis in Arabidopsis. Branch pathways, enzymes, and end products present in other plants but not Arabidopsis are shown in light gray. Abbreviations cinnamate-4-hydroxylase (C4H), chalcone isomerase (CHI), chalcone synthase (CHS), 4-coumarate CoA-ligase (4CL), dihydroflavonol 4-reductase (DFR), flavanone 3-hydroxylase (F3H), flavonoid 3 or 3 5 hydroxylase (F3 H, F3 5 H), leucoanthocyanidin dioxygenase (LDOX), leucoanthocyanidin reductase (LCR), O-methyltransferase (OMT), phenylalanine ammonia-lyase (PAL), rhamnosyl transferase (RT), and UDP flavonoid glucosyl transferase (UFGT).

Table 6.1 Abbreviations BAN, BANYULS bHLH, basic helix-loop-helix CHS, chalcone synthase CHI, chalcone isomerase DFR, dihydroflavonol reductase F3H, flavonol 3-hydroxylase F3 H, flavonoid 3 -hydroxylase FLS, flavonol synthase icx, increased chalcone synthase expression LDOX, leucoanthocyanidin dioxygenase LCR, leucoanthocyanidin reductase MATE, multidrug and toxic compound extrusion NR, not yet reported tt, transparent testa ttg, transparent testa glabrous the WD40 and WRKY transcription factors are named for conserved amino acid sequences within these proteins. PC = personal communication.

SCHOENBOHM, C., MARTENS, S., EDER, C., FORKMANN, G WEISSHAAR, B., Identification of the Arabidopsis thaliana flavonoid 3 -hydroxylase gene and functional expression of the encoded P450 enzyme, Biol. Chem., 2000,381, 749-753. 

CL, 4-coumarate CoA ligase CHS, chalcone synthase CHI, chalcone isomerase F3H, flavanone 3-hydroxylase DFR, dihydroflavonol 4-reductase ANS, anthocyanidin synthase FGT, flavonoid 3-O-glucosyltransferase. 

SHIMADA, Y., NAKANO-SHIMADA, R, OHBAYASHI, M OKINAKA, Y., KIYOKAWA, S., KIKUCHI, Y., Expression of chimeric P450 genes encoding flavonoid-3 ,5 -hydroxylase in transgenic tobacco and petunia plants, FEBSLett., 1999, 461,241-245. 

The riocus encodes the enzyme flavonoid 3 -hydroxylase (F3 H) [17, 18], and is an important controller of flux in the anthocyanin pathway in soybean seed coats (Fig. 4.1). F3 H diverts metabolic flux away from biosynthesis of orange (pelargoni-din) and blue (delphinidin) anthocyanins toward the red cyanidin-3-(9-glucoside, which is the main anthocyanin in the seed coats of black soybean [7, 8]. T increases the accumulation of delphidin-3-O-glucoside in black seed coats, even though it is not required for its biosynthesis [19]. Possible mechanisms for this include positive feedback, or the stabilization of the putative anthocyanin biosynthetic metabolon [20] by F3 Fl-derived membrane anchoring (Fig. 4.1). 

The W1 locus encodes flavonoid 3 5 -hydroxylase F3 5 H) [21]. F3 5 H diverts metabolic flux into the blue delphinidin branch of anthocyanin biosynthesis (Fig. 4.1). In the absence of F3 H activity (f), Wi and recessive wl give imperfect black and buff seed colors, respectively [10]. However, in black seeds, F3 H (T) phenotypically masks Wl. In contrast to its role in seeds, Wl has a prominent role in flower colors, as delphinidin-based anthocyanins are the major pigments in purple soybean flowers [22, 23]. Interestingly, F3 5 H is expressed at very low levels in flowers and seeds [21]. This suggests that, out of the two branch-point genes (i.e., F3 H and F3 5 H), it is the strong expression of F3 H in seed coats and weak expression in the flowers that determines preferential accumulation of cyanidin-based and delphinidin-based anthocyanins in these respective tissues [21]. 

Toda K, Yang D, Yamanaka N et al (2002) A single-base deletion in soybean flavonoid 3 -hydroxylase gene is associated with gray pubescence color. Plant Mol Biol 50 187-196... 

Zabala G, Vodkin L (2003) Cloning of the pleiotropic T locus in soybean and two recessive alleles that differentially affect structure and expression of the encoded flavonoid 3 hydroxylase. Genetics 163 295-309... 

Flavanone 3 -hydroxylase (F3 H ECl.14.13.21 CYP75B) activity was initially identified in microsomal preparations of golden weed (Haplopappus gracilis) [110]. E3 H from irradiated parsley cell cultures was later biochemically analyzed and characterized as a cytochrome P450 having an absolute requirement for NADPH and molecular oxygen as cofactors [111]. The enzyme has been shown to have activity with flavanones, flavones, dihydroflavonols, and flavonols, but does not appear to have activity with anthocyanidins [111]. The first cDNA clone for E3 H was isolated from Petunia [112]. It has been suggested that E3 H may serve as an anchor for the proposed flavonoid multi-enzyme complex on the cytosolic surface of the endoplasmic reticulum [44]. 

HagmannML, HeUerW, GrisebachH (1983) Induction and characterization of a microsomal flavonoid 3 -hydroxylase from parsley cell cultures. Eur J Biochem 134(3) 547-554... 

Brugliera F, Barri-ReweU G, Holton TA, Mason JG (1999) Isolation and characterization of a flavonoid 3 -hydroxylase cDNA clone corresponding to the Htl locus of Petunia hybrida. Plant J 19(4) 441 51... 

Coumaroyl-CoA is produced from the amino acid phenylalanine by what has been termed the general phenylpropanoid pathway, through three enzymatic conversions catalyzed by phenylalanine ammonia-lyase (PAL), cinnamate 4-hydroxylase (C4H), and 4-coumarate CoA ligase (4CL). Malonyl-CoA is formed from acetyl-CoA by acetyl-CoA carboxylase (ACC) (Figure 3.2). Acetyl-CoA may be produced in mitochondria, plastids, peroxisomes, and the cytosol by a variety of routes. It is the cytosolic acetyl-CoA that is used for flavonoid biosynthesis, and it is produced by the multiple subunit enzyme ATP-citrate lyase that converts citrate, ATP, and Co-A to acetyl-CoA, oxaloacetate, ADP, and inorganic phosphate. ... 

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