Fatty acid carbon source

Chromobacterium violaceum produces poly(3HB) or poly (3HB-CO-3HV) when grown on a fatty acid carbon source. When the PHA polymerase gene of C. violaceum was transferred... 

Table 4.2 lists some common examples of fatty acids, their sources, common names, and systematic names [1]. Many additional terms are used to distinguish unsaturated fatty acids by the location of the first double bond relative to the omega (co) or —CHg carbon. Thus oleic acid is both A and a C18 1 co-9 acid. Linoleic acid is a and C18 2 (0-6 acid. Linolenic acid is both and a C18 3 co-3 acid. 

Fatty acids may be converted by fungi after hydrolysis by lipase. Other organic acid carbon sources would be oleic, linoleic and linolenic acids. These might also serve as foam control agents. Carbon dioxide is a possible carbon source in nature, but is not practical commercially due to low growth rates. 

The enzymes in the pathways of fatty acid activation and p-oxidation (the synthetases, the carnitine acyltransferases, and the dehydrogenases of p-oxidation) are somewhat specific for the length of the fatty acid carbon chain. The chain length specificity is divided into enzymes for long-chain fatty acids (C20 to approximately C12), medium-chain (approximately C12 to C4), and short-chain (C4-C2). The major lipids oxidized in the liver as fuels are the long-chain fatty acids (palmitic, stearic, and oleic acids), because these are the lipids that are synthesized in the liver, are the major lipids ingested from meat or dairy sources, and are the major form of fatty acids present in adipose tissue triacylglycerols. The liver, as well as many other tissues, uses fatty acids as fuels when the concentration of the fatty acid-albumin complex is increased in the blood. 

Fatty acids derived from animal and vegetable sources generally contain an even number of carbon atoms siace they are biochemically derived by condensation of two carbon units through acetyl or malonyl coenzyme A. However, odd-numbered and branched fatty acid chains are observed ia small concentrations ia natural triglycerides, particularly mminant animal fats through propionyl and methylmalonyl coenzyme respectively. The glycerol backbone is derived by biospeciftc reduction of dihydroxyacetone. 

Fatty amines are nitrogen derivatives of fatty acids, olefins, or alcohols prepared from natural sources, fats and oils, or petrochemical raw materials. Commercially available fatty amines consist of either a mixture of carbon chains or a specific chain length from C The amines are classified as... 

Carboxylate soaps are most commonly formed through either direct or indirect reaction of aqueous caustic soda, ie, alkaH earth metal hydroxides such as NaOH, with fats and oils from natural sources, ie, triglycerides. Fats and oils are typically composed of both saturated and unsaturated fatty acid molecules containing between 8 and 20 carbons randomly linked through ester bonds to a glycerol [56-81-5] backbone. Overall, the reaction of caustic with triglyceride yields glycerol (qv) and soap in a reaction known as saponification. The reaction is shown in equation 1. 

Although vegetable oils and animals fats were commonly used in ancient times, most higher acids were not known until the beginning of the nineteenth century. Then the nature of the naturally occurring 18-carbon fatty acids was estabHshed, and hundreds of long-chain fatty acids have been isolated from natural sources and characterized. 

Carboxylic acids having 6—24 carbon atoms are commonly known as fatty acids. Shorter-chain acids, such as formic, acetic, and propionic acid, are not classified as fatty acids and are produced synthetically from petroleum sources (see Acetic acid Formic acid and derivatives Oxo process). Fatty acids are produced primarily from natural fats and oils through a series of unit operations. Clay bleaching and acid washing are sometimes also included with the above operations in the manufacture of fatty acids for the removal of impurities prior to subsequent processing. 

Fatty acids with odd numbers of carbon atoms are rare in mammals, but fairly common in plants and marine organisms. Humans and animals whose diets include these food sources metabolize odd-carbon fatty acids via the /3-oxida-tion pathway. The final product of /3-oxidation in this case is the 3-carbon pro-pionyl-CoA instead of acetyl-CoA. Three specialized enzymes then carry out the reactions that convert propionyl-CoA to succinyl-CoA, a TCA cycle intermediate. (Because propionyl-CoA is a degradation product of methionine, valine, and isoleucine, this sequence of reactions is also important in amino acid catabolism, as we shall see in Chapter 26.) The pathway involves an initial carboxylation at the a-carbon of propionyl-CoA to produce D-methylmalonyl-CoA (Figure 24.19). The reaction is catalyzed by a biotin-dependent enzyme, propionyl-CoA carboxylase. The mechanism involves ATP-driven carboxylation of biotin at Nj, followed by nucleophilic attack by the a-carbanion of propi-onyl-CoA in a stereo-specific manner. 

The fatty adds commonly encountered in biological systems are straight chained alkanoic or alkenoic adds, containing an even number of carbon atoms (usually Ch-Ch). natural n Senera / these fatty adds can be produced readily by extraction of the lipids from sources natural sources and saponifying the neutral triglycerides. This is satisfactory providing a mixture of fatty acids is acceptable. Purification of spedfic fatty adds from the saponification mixture increases the costs considerably. 

On the other hand, the scrambled model of carbon sourcing does not seem to be applicable when we consider the metabolic fate of fatty acids. We find that there are partial barriers to the movement of FA-derived carbon atoms into the synthesis of proteins. This partial restriction leads us to expect a trophic level effect in the fractionation between collagen and bone apatite or respired CO2 of which apatitic carbonate is a sample. The magnitude of the fractionation depends on two separate fractionation factors which cannot be disentangled by analyses of bone samples alone. 

Citrate is isomerized to isocitrate by the enzyme aconitase (aconitate hydratase) the reaction occurs in two steps dehydration to r-aconitate, some of which remains bound to the enzyme and rehydration to isocitrate. Although citrate is a symmetric molecule, aconitase reacts with citrate asymmetrically, so that the two carbon atoms that are lost in subsequent reactions of the cycle are not those that were added from acetyl-CoA. This asymmetric behavior is due to channeling— transfer of the product of citrate synthase directly onto the active site of aconitase without entering free solution. This provides integration of citric acid cycle activity and the provision of citrate in the cytosol as a source of acetyl-CoA for fatty acid synthesis. The poison fluo-roacetate is toxic because fluoroacetyl-CoA condenses with oxaloacetate to form fluorocitrate, which inhibits aconitase, causing citrate to accumulate. 

Biochemical tests are usually performed after pure cultures have been obtained. The standard indole, methyl red, Voges-Proskauer, citrate, and litmus milk tests may be used to show important physiological characteristics. To study the functional diversity of bacteria, the utilization of carbohydrates, amines, amides, carboxylic acids, amino acids, polymers, and other carbon and nitrogen sources can be tested.28 Dilution-based most-probable number (MPN) techniques with phospholipid fatty acids as biomarkers have been employed for studying different bacterial species in lakes.40 The patterns of antibiotic resistance in bacteria isolated from natural waters have been useful for identifying sources of water pollution.34... 

In the pathway, the 3HA-CoA is produced from the carbon source by the fatty acid /1-oxidation route so that the 3HA-CoA so formed can be utilized either for the production of a PHA directly or for the production of acetyl-CoA, which results in the formation of 3HA-CoA containing two carbons less than the original 3HA. 3HA-CoA thus formed can similarly be utilized for the production of... 

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