2.4- Dinitrofluorobenzene reagent

Dinitrofluorobenzene (Sanger s reagent) [70-34-8] M 186.1, m 25-27 , b 133 /2mm, 140-141 /5mm, d 1.483. Crystd from ether or EtOH. Vacuum distd through a Todd Column (see p. 174). If it is to be purified by distn in vacuo, the distn unit must be allowed to cool before air is allowed into the apparatus otherwise the residue carbonises spontaneously and an EXPLOSION may occur. The material is a skin irritant and may cause serious dermatitis. 

Acid fluondes such as oxalyl fluoride, tnchloroacetyl fluonde, propionyl fluonde, as well as Sanger s reagent, 2,4-dinitrofluorobenzene, easily cleave N,N-acetals (aminals) to give high yields of fluoromethyldialkylamines [82] (equation 20) (Table 5)... 

Nucleophilic aromatic substitution is much less common than electrophilic substitution but nevertheless does have certain uses. One such use is the reaction of proteins with 2,4-dinitrofluorobenzene, known as Sanger s reagent, to attach a "label" to the terminal NH2 group of the amino acid at one end of the protein chain. 

Another reagent, 2,4-dinitrofluorobenzene, also known as Sanders Reagent, has been used in a similar manner in the analysis of amino acids and amines (41). 

Fluorobenzene-type compounds have been used as functional groups in homobifunctional crosslinking agents (Chapter 4, Section 4). Their reaction with amines involves nucleophilic displacement of the fluorine atom with the amine derivative, creating a substituted aryl amine bond (Reaction 9). Detection reagents incorporating reactive aryl chemistry include 2,4-dinitrofluorobenzene and trinitrobenzenesulfonate (Eisen et al., 1953). These compounds form... 

Chemical methods for determining the amino acid sequence of a peptide or protein have been developed, and the normal approach is to exploit the properties of the amino group at the Al-terminus. A long-established procedure for identifying the N-terminal amino acid is use of the Sanger reagent 2,4-dinitrofluorobenzene. This reacts with an amine by nucleophilic displacement of the fluorine. 

A related and more sensitive method makes a sulfonamide of the terminal NH2 group with a reagent called dansyl chloride. As with 2,4-dinitrofluorobenzene, the peptide must be destroyed by hydrolysis to release the N-sulfonated amino acid, which can be identified spectroscopically in microgram amounts ... 

The reaction of 2,4-dinitrofluorobenzene (DNFB) (Sanger s reagent [10]) with amino acids is another useful technique which is often employed for the analysis of N-terminal amino acids by TLC and column chromatography after derivatization. The reaction involved in product formation is shown in Fig.4.6. The separated derivatives are determined by measuring the quenching of fluorescence on TLC plates or by UV analysis after column chromatography. The generalized absorption curves of dinitrophenyl (DNP)-amino acids in acidic and alkaline solutions are shown in Fig. 4.7. 

By the primary structure of a peptide or protein, we mean its amino acid sequence. Complete hydrolysis gives the amino acid content. The N-terminal amino acid can be identified by the Sanger method, using 2,4-dinitrofluorobenzene. The Edman degradation uses phenyl isothiocyanate to clip off one amino acid at a time from the N-terminus. Other reagents selectively cleave peptide chains at certain amino acid links. A... 

Fluoride ion is usually a poor leaving group because it is not very polarizable. Fluoride serves as the leaving group in the Sanger reagent (2,4-dinitrofluorobenzene), used in the determination of peptide structures (Chapter 24). Explain why fluoride works as a leaving... 

The Sanger method for N-terminus determination is a less common alternative to the Edman degradation. In the Sanger method, the peptide is treated with the Sanger reagent, 2,4-dinitrofluorobenzene, and then hydrolyzed by reaction with 6 M aqueous HC1. The N-terminal amino acid is recovered as its 2,4-dinitrophenyl derivative and identified. 

A method for determining the N-terminal amino acid of a peptide. The peptide is treated with 2,4-dinitrofluorobenzene (Sanger s reagent), then completely hydrolyzed. The derivatized amino acid is easily identified, but the rest of the peptide is destroyed in the hydrolysis, (p. 1180)... 

Hall et al. [139] produced a low-molar-mass series of polyarylamine dendrimers by using a protection/deprotection scheme involving the protected, branch cell reagent 2,4-dinitrofluorobenzene. Using various anilines as initiator cores, the... 

Hitherto we have concentrated on electrophilic aromatic substitution. However, certain n-deficient aromatic rings are deactivated towards electrophilic attack but are susceptible to nucleophilic addition and a subsequent elimination. A particular example is 2,4-dinitrochloroben-zene. The electron-withdrawing nitro groups facilitate a Michael-type addition of a nucleophile to give a so-called Meisenheimer intermediate (Scheme 4.8). Collapse of the Meisenheimer intermediate and reversion to the aromatic system may lead to expulsion of the halide ion, as exemplified by the preparation of 2,4-dinitrophenylhydrazine. 2,4-Dinitrofluorobenzene is known as Sanger s reagent and is used for the detection of the N-terminal amino acids in peptides. 

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