DbSNP

Polymorphisms in italics were obtained from dbSNP (www.nchi.nlm.nih.gov/SNP/) on July 2001. 

Fig. 1.4 a Searching results of dbSNP using the keyword human TAPI. b MapView of the SNP rs28986263 from dbSNP... 

Sherry ST, Ward MH, Kholodov M et al. dbSNP the NCBI database of genetic variation. Nucleic Acids Rei 2001 29 308-311. 

Methylentetrahydrofolate dehydrogenase (MTHFDl) is a 72,429 base pair gene with 27 exons located on chromosome 14q24 (13). To date, eight coding region polymorphisms have been reported in dbSNP with limited data on ethnic group frequency... 

Although public databases such as dbSNP18 do contain a large number of known SNPs including their gene and positional information, a significant fraction of SNP mentions in scientific text cannot be mapped to dbSNP entries.19... 

This list was assembled using NCBI Entrez SNP, dbSNP BUILD 128. Abbreviations dbSNP rs No, single nucleotide polymorphism database reference cluster number ADRB2, beta-2-adrenergic receptor, surface. 

NCBI dbSNP SNP linked to Gene ADRB2 (genelD 154) Via Contig Annotation. Available at http //www.ncbi.nlm.nih.gov/SNP/snp refcgi locusId=154 [Accessed on March 5, 2008]. 

The SNP Consortium Ltd. URL http //snp.cshLorg/. A nonprofit foundation organized for the purpose of providing public genomic data. Members include a number of pharmaceutical companies, IBM, Motorola, and the Wellcome Trust. Public private co-operative effort contributing to the HapMap Project and dbSNP. Expect to see more public/private cooperation, particularly in precompetitive research areas. 

Single Nucleotide Polymorphism Database (dbSNP) of Nucleotide Sequence Variation. URL http //www.ncbi.nlm. nih.gov/SNP/index.html. Uses SNP in the much looser sense of minor genetic variations and includes microsatellite repeats and small insertion/deletion polymorphisms. 

Search Promo er Sequences for SNPs from dbSNP... 

Single-nucleotide polymorphisms (SNP) presentation. FOOTER has recently made available a function that will allow the identification and presentation of known SNPs in the examined promoters. The SNPs are derived from the dbSNP database (12). Though the presence or absence of SNPs in the promoter region(s) does not weight into the FOOTER analysis, it can provide useful information to the user about possible sites that could be affected by a polymorphism. 

SNPs. If the user had selected to search the human and rodent sequences for SNPs, their location will be displayed in the PNG image. If any SNPs fall within 20 bp of a reported predicted site, the SNP will be identified as a highlighted hyperlink in the tabular results. The link will redirect the user to the dbSNP information page for that particular SNP. Two HTML pages will also be produced that show every SNP found as a highlighted hyperlink within the individual promoter regions. 

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