Crystal structures determination methods

The formation of acyl halide-Lewis acid complexes have been observed by several methods. For example, both 1 1 and 1 2 complexes of acetyl chloride, with AICI3 can be observed by NMR spectroscopy. The existence of acylium ions has been demonstrated by X-ray diffraction studies on crystalline salts. For example, crystal structure determinations have been reported for /i-methylphenylacylium and acetylium ions as SbFg salts. There is also a good deal of evidence from NMR measurements which demonstrates that acylium ions can exist in nonnucleophilic solvents. " The positive charge on acylium ions is delocalized onto the oxygen atom. This delocalization is demonstrated in particular by the short O—C bond lengths in acylium ions, which imply a major contribution from the structure having a triple bond ... 

Among the variety of nitrogen-containing fulvalenes emerging from types 7-14, X-ray structural determinations have been performed on about 20 representative examples. Tire first crystal structure determination was carried out by application of the folding-molecule method on 3,3 -diphenyl-l,l -bi-isoindolylidene 64 (R = FI) (71CB3108). Tire dimeric isoindolenine system... 

In this section we will discuss perturbation methods suitable for high-energy electron diffraction. For simplicity, in this section we will be concerned with only periodic structures and a transmission diffraction geometry. In the context of electron diffraction theory, the perturbation method has been extensively used and developed. Applications have been made to take into account the effects of weak beams [44, 45] inelastic scattering [46] higher-order Laue zone diffraction [47] crystal structure determination [48] and crystal structure factors refinement [38, 49]. A formal mathematical expression for the first order partial derivatives of the scattering matrix has been derived by Speer et al. [50], and a formal second order perturbation theory has been developed by Peng [22,34],... 

Macromolecule single-crystal structure determination, 26 426-427 Macromolecule structure, interactions related to, 13 742-743 Macromolecule X-ray diffraction, Laue method for, 26 442... 

Following the recently developed energy minimisation method described by M.U. Schmidt [2], for the first time three dimensional crystal structure determinations were carried out with P.Y.13 and P.Y.14 [3]. The studies showed the molecules to be planar with the terminal phenyl rings twisted by 4-10° with respect to the acetoacetyl fragments, the degree of planarity of P.Y.14 found to be a little lower than that of P.Y.13. 

Ab initio methods for polymorph, hydrate and solvate prediction are highly prized by the industry and good progress has been made in this field in recent years. This work is still a number of years from routine commercial application however, and polymorph screening experiments together with crystal structure determination, remain critical tasks for today s Pharmaceutical companies. 

Recent developments and prospects of these methods have been discussed in a chapter by Schneider et al. (2001). It was underlined that these methods are widely applied for the characterization of crystalline materials (phase identification, quantitative analysis, determination of structure imperfections, crystal structure determination and analysis of 3D microstructural properties). Phase identification was traditionally based on a comparison of observed data with interplanar spacings and relative intensities (d and T) listed for crystalline materials. More recent search-match procedures, based on digitized patterns, and Powder Diffraction File (International Centre for Diffraction Data, USA.) containing powder data for hundreds of thousands substances may result in a fast efficient qualitative analysis. The determination of the amounts of different phases present in a multi-component sample (quantitative analysis) is based on the so-called Rietveld method. Procedures for pattern indexing, structure solution and refinement of structure model are based on the same method. 

The other change that needed to be made in the synthesis of RSR 13 for in vivo administration was the method of purification. RSR 13 is used in vivo as the sodium salt. I prepared the first batch for in vivo toxicology by triturating RSR 13 sodium salt with acetone to remove any vestiges of water. However, the first industrial scale-up procedure called for crystallization of the salt from ethanol-water. The ethanol-water crystals were not as soluble as the acetone triturated method and could not be formulated at a reasonable volume. We performed the crystal structure determination of the ethanol-water crystals and found that it was a heptahydrate (Figure 17.5) [50]. The problem for large-scale production of RS R13 was solved eventually by the industrial producers of RSR 13. 

Since X-rays are scattered by electrons, isotopes of the same element cannot be distinguished by a routine X-ray crystal structure determination. Consequently, the determination of the relative or absolute configuration based on. for example, hydrogen vs. deuterium, such as in compounds of type 2-4, is not viable by this method. 

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