Transient cross-links

Dustin, M.L. and Springer, T.A. (1989). T cell receptor cross-linking transiently stimulates adhesiveness through LFA-1. Nature 341, 619. 

The reversibility of DNA cross-linking by the QMPs illustrated in Fig. 9.4 has not been examined directly but is presumably controlled as before by the leaving group strength of the DNA nucleophiles and the electronic characteristics of the QM intermediates. Unless both possible QMs form simultaneously, the cross-linking agents still remain bound to DNA at one site as the other is transiently released during... 

We therefore sought to evaluate reproducibility of shotgun proteomics in studies of archival FFPE tissue. Because FFPE samples are more complex than non-cross-linked samples, we evaluated FFPE human liver for analytical reproducibility and confidence in protein assignments.20 This complexity strengthens the argument for using high-resolution separations to maximize analyte concentration and minimize matrix effects. In this case, we used transient capillary isotachophoresis/capillary zone electrophoresis (cITP/cZE) in place of IEF to help address this effect. cITP/cZE has a resolution superior even to cIEF (90% of identified peptides in 1 fraction, 95% in 2 fractions or less for cITP/cZE, vs. 75% and 80%, respectively, for cIEF). 

Chiral separations result from the formation of transient diastereomeric complexes between stationary phases, analytes, and mobile phases. Therefore, a column is the heart of chiral chromatography as in other forms of chromatography. Most chiral stationary phases designed for normal phase HPLC are also suitable for packed column SFC with the exception of protein-based chiral stationary phases. It was estimated that over 200 chiral stationary phases are commercially available [72]. Typical chiral stationary phases used in SFC include Pirkle-type, polysaccharide-based, inclusion-type, and cross-linked polymer-based phases. 

The results were compared to MD-simulations [317]. Whereas the scattering function of pure PEO could be well described, the dynamics of the salt-loaded samples deviates from the predictions obtained with various electrostatic interaction models. The best but still not perfect and - at least for longer times -unphysical model assumes Hookean springs between chains to simulate the Na-ion mediated transient cross-links [317]. 

In Fig. 6.22 the results of a viscosity scahng by f— fxT/rj (T) of the relaxation data are shown. Such a scaling is motivated by the Rouse model and should hold for the a-relaxation. The pure PPO data (right) behave according to this expectation in contrast the PP0-IiC104 curves deviate considerably. This indicates that the coupling factor between microscopic friction and viscosity depends on temperature, possibly due to transient cross-linking via Li-ions. 

A similar pattern of reactivity has been observed by Burrows and coworkers for the reaction between A -acetyllysine methyl ester (Lys) and dG. This reaction was studied in order to gain an understanding of structural aspects of DNA-protein cross-links (DPCs). These cross-links are regarded as a common lesion of oxidative damage to cells, but remain, from a chemical point, a poorly understood DNA lesion. As pointed out by Burrows, oxidation of protein-DNA complexes should occur preferentially at the primary amines since these sites have a lower oxidation potential (1.1 V vs. NHE, pH 10) than G. While protonation of the primary amine inhibits the oxidative process, transient deprotonation of a lysine residue would give rise to a lysine aminyl radical (or aminium radical cation). Using... 

Tanaka F, Edwards SF. Viscoelastic properties of physically cross-linked networks—transient network theory. Macromolecules 1992 25 1516-1523. 

Recently chloromethylated polystyrene (CMS), a highly sensitive, high resolution electron resist with excellent dry etching durability, was developed. Very recently reactive intermediates in irradiated polystyrene, which is a starting material of CMS, have been studied and the transient absorption spectra of excimer (2-4), triplet states (2,5), charge-transfer complexes, and radical cations (6) of polystyrene have been measured. The present paper describes the cross-linking mechanism of the high sensitivity CMS resist and compares it to that of polystyrene on the basis of data on reactive intermediates of polystyrene and CMS. 

MAPs can be classified in a similar manner to actin-binding proteins. Like their actin-binding counterparts, MAPs can nucleate, cap, stabilize and cross-link microtubules. Several motor proteins have been identified in the last few years which are involved in force generation in a number of microtubule-based networks. As with actin-binding proteins, MAPs can be targeted, on a constitutive or transient basis, to certain regions of a cell. This allows specialized microtubule-based networks to be constructed and perform their tasks in specific locations. The properties and functions of some of these MAPs will be explored in the examples given below. 

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