Carotenoid natural selection

Fig. 2. Natural selection of carotenoid configuration in the reaction center (RC) and light-harvesting complex (LHC) of purple photosynthetic bacteria. See text for discussion. Figure source Koyama (1991) Structure and function of carotenoids in photosynthetic systems. J Photochem Photobiol, B Biol 9 208.

Koyama Y, Takatsuka I, Kanaji M, Tomimoto K, Kito M, Shimamura T, Yamashita J, Saiki K and Tsukida K (1990) Configurations of carotenoids in the reaction center and lightharvesting complex of Rhodospirillum rubrum. Natural selection of carotenoid configurations by pigment protein complexes. Photochem Photobiol 51 119-128... 

The spectroscopic and photochemical properties of the synthetic carotenoid, locked-15,15 -cA-spheroidene, were studied by absorption, fluorescence, CD, fast transient absorption and EPR spectroscopies in solution and after incorporation into the RC of Rb. sphaeroides R-26.1. High performance liquid chromatography (HPLC) purification of the synthetic molecule reveal the presence of several Ai-cis geometric isomers in addition to the mono-c/x isomer of locked-15,15 -c/x-spheroidene. In solution, the absorption spectrum of the purified mono-cA sample was red-shifted and showed a large c/x-peak at 351 nm compared to unlocked all-spheroidene. Spectroscopic studies of the purified locked-15,15 -mono-c/x molecule in solution revealed a more stable manifold of excited states compared to the unlocked spheroidene. Molecular modeling and semi-empirical calculations revealed that geometric isomerization and structural factors affect the room temperature spectra. RCs of Rb. sphaeroides R-26.1 in which the locked-15,15 -c/x-spheroidene was incorporated showed no difference in either the spectroscopic properties or photochemistry compared to RCs in which unlocked spheroidene was incorporated or to Rb. sphaeroides wild type strain 2.4.1 RCs which naturally contain spheroidene. The data indicate that the natural selection of a c/x-isomer of spheroidene for incorporation into native RCs of Rb. sphaeroides wild type strain 2.4.1 was probably more determined by the structure or assembly of the RC protein than by any special quality of the c/x-isomer of the carotenoid that would affect its ability to accept triplet energy from the primary donor or to carry out photoprotection. 

In summary, NMR spectroscopy is an extremely versatile tool useful that enables researchers to understand the structure of natural products such as carotenoids. For a full structural assignment, the compound of interest has to be separated from coeluents. Thus, it is a prerequisite to employ tailored stationary phases with high shape selectivity for the separation in the closed-loop on-line LC-NMR system. For the NMR detection, microcoils prove to be advantageous for small quantities of sample. Overall, the closed-loop system of HPLC and NMR detection is very advantageous for the structural elucidation of air- and UV-sensitive carotenoids. 

Carotenoids are also present in animals, including humans, where they are selectively absorbed from diet (Furr and Clark 1997). Because of their hydrophobic nature, carotenoids are located either in the lipid bilayer portion of membranes or form complexes with specific proteins, usually associated with membranes. In animals and humans, dietary carotenoids are transported in blood plasma as complexes with lipoproteins (Krinsky et al. 1958, Tso 1981) and accumulate in various organs and tissues (Parker 1989, Kaplan et al. 1990, Tanumihardjo et al. 1990, Schmitz et al. 1991, Khachik et al. 1998, Hata et al. 2000). The highest concentration of carotenoids can be found in the eye retina of primates. In the retina of the human eye, where two dipolar carotenoids, lutein and zeaxan-thin, selectively accumulate from blood plasma, this concentration can reach as high as 0.1-1.0mM (Snodderly et al. 1984, Landrum et al. 1999). It has been shown that in the retina, carotenoids are associated with lipid bilayer membranes (Sommerburg et al. 1999, Rapp et al. 2000) although, some macular carotenoids may be connected to specific membrane-bound proteins (Bernstein et al. 1997, Bhosale et al. 2004). 

The characterization and quantification of the complement of flavonoids and carotenoids in foods and biological samples will be of continued interest, especially with respect to determining their contribution to and role in human health and disease prevention. Because these compounds often exist at trace levels in complex natural matrices and various biological samples, the development of selective and... 

The special potential for constructing double bonds stereoselectively, often necessary in natural material syntheses, makes the Wittig reaction a valuable alternative compared to partial hydrogenation of acetylenes. It is used in the synthesis of carotenoids, fragrance and aroma compounds, terpenes, steroides, hormones, prostaglandins, pheromones, fatty acid derivatives, plant substances, and a variety of other olefinic naturally occurring compounds. Because of the considerable volume of this topic we would like to consider only selected paths of the synthesis of natural compounds in the following sections and to restrict it to reactions of phosphoranes (ylides) only. 

The partial reduction of substrates containing triple bonds is of considerable importance not only in research, but also commercially for stereoselectively introducing (Z)-double bonds into molecular frameworks of perfumes, carotenoids, and many natural products. As with catalytic hydrogenation of alkenes, the two hydrogen atoms add syn from the catalyst to the triple bond. The high selectivity for alkene formation is due to the strong absorption of the alkyne on the surface of the catalyst, which displaces the alkene and blocks its re-adsorption. The two principal metals used as catalysts to accomplish semireduction of alkynes are palladium and nickel. 

Chromatographic processes eliminate high temperatures and even allow the complete deterpenation of citms oils. Additionally they allow the enrichment of non-volatile compounds. Selectively enhanced fractions of coumarins and tocopherols, natural flavonoids and carotenoids are well suited for usage in special applications which feature excellent stability and capture the desired aroma profile. 

Many carotenoids have chiral centers that are due to the presence of asymmetric carbon atoms. However, natural carotenoids exist only in one of the possible enantiomeric forms, because the biosynthesis is enantiomere selective. 

Finally, since many natural product compounds have been investigated with various chromatographic modes and detection techniques, a selection of examples has been summarized in this chapter. This information has been compiled in the form of tables for well-researched classes of secondary metabolites selected from the major subgroups of isoprenoids (mono-, sesqui-, di-, and triterpenes iridoids and secoiridoids carotenoids saponins and ecdysteroids), of phenolics (coumarins, flavonoids, and isoflavonoids), and of alkaloids. 

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