Group azides

Kinetic studies of pyrolysis of azides, giving oxadiazole A-oxides in near-quantitative yields, showed that the 5-azido-6-nitroquinoline pyrolyzed in acetic acid 27.6 times faster than did 5-azidoquinolines, because of the -M effect of the group adjacent to the azide group (85AJC1045). 

Treatment of 8-azidomethylperhydropyrido[l,2-c]pyrimidin-l-one 157 with methyl triflate and catalytic hydrogenation of the azide group led to the formation of tricyclic guanidine derivative 158 (01JA8851). Hydroxy group of 149 was protected with methoxymethyl chloride, and the p-methoxybenzyl protecting group (PMB) was eliminated by treatment with DDQ. 

Methyl Azide.—In our earlier investigation of methyl azide2 it was concluded that the molecules contain a linear azide group with dimensions corresponding to resonance between the... 

It is not only the activity that can be altered by incorporation of noncoded amino acids. Introduction of structures possessing certain chemical functions leads to the possibility of highly regioselective modification of enzymes. For example, selective enzymatic modification of cystein residues with compounds containing azide groups has led to the preparation of enzymes that could be selectively immobilized using click chemistry methods [99]. 

Boc-protection needed during reductive hydrogenation of the azide group to prevent reaction medium becoming basic Competitive de-chlorination of the aryl chloride group occurs under basic conditions... 

Boc-protection needed during reductive hydrogenation of the azide group... 

An azide group can be transformed into a thiocyanate group by reduction with LiAlH4 followed by treatment with NJSl -thiocarbonyldiimidazole.[ 14]... 

Studies by Almerico and co-workers into the synthesis of annelated l,2,3-triazolo[l,5- ]pyrimidines have led to an efficient method for the formation of the five- and six-membered rings onto a substituted pyrrole in good yield <2002T9723>. The reaction proceeds initially via a 1,3-dipolar cycloaddition between the azide group of 300 and the... 

Another ABPP platform integrates click chemistry (CC), where an alkyne or azide group in the ABP acts as a latent attachment point for a reporter tag [34,35]. Replacing bulky reporter groups with an alkyne extends ABP design to include probes that function in live cells and... 

Figure 4.21 BASED can react with molecules after photoactivation to form crosslinks with nucleophilic groups, primarily amines. Exposure of its phenyl azide groups to UV light causes nitrene formation and ring expansion to the dehydroazepine intermediate. This group is highly reactive with amines. The cross-bridge of BASED is cleavable using a disulfide reducing agent.

Figure 5.16 Photoactivation of a phenyl azide group with UV light results in the formation of a short-lived nitrene. Nitrenes may undergo a number of reactions, including insertion into active carbon-hydrogen or nitrogen-hydrogen bonds and addition to points of unsaturation in carbon chains. The most likely route of reaction, however, is to ring-expand to a dehydroazepine intermediate. This group is highly reactive toward nucleophiles, especially amines.

Of the following amine-reactive and photoreactive crosslinkers, the overwhelming majority use an aryl azide group as the photosensitive functional group. Only a few use alternative photoreactive chemistries, particularly perfluorinated aryl azide, benzophenone, or diazo compounds. For general background information on photoreactive crosslinkers, see Das and Fox (1979), Kiehm and Ji (1977), Vanin and Ji (1981), and Brunner (1993). 

HSAB (N-hydroxysuccinimidyl-4-azidobenzoate) is a heterobifunctional reagent containing an amine-reactive NHS ester on one end and a photoreactive phenyl azide group on the other end... 

Figure 5.20 Sulfo-HSAB is a short photoreactive crosslinker that can be used to modify amine-containing molecules through its NHS ester end to form amide linkages. After photoactivation, the phenyl azide group can react with amines to create a covalent bond.

Reactions done with HSAB should involve dissolution of the crosslinker in organic solvent prior to addition to an aqueous reaction medium. DMSO or DMF are suitable solvents to prepare concentrated stock solutions. Protect all solutions from light to avoid loss of photoreac-tive phenyl azide groups prior to the desired point of photolysis. 

SANPAH (N-succinimidyl-6-(4 -azido-2 -nitrophenylamino)hexanoate) is a heterobifunctional crosslinking agent containing an NHS ester and a photoreactive phenyl azide group (Thermo Fisher). The NHS ester end can react with amine groups in proteins and other molecules, forming... 

SADP, N-succinimidyl-(4-azidophenyl)l,3 -dithiopropionate, is a photoreactive heterobifunctional crosslinker that is cleavable by treatment with a disulfide reducing agent (Thermo Fisher). The crosslinker contains an amine-reactive NHS ester and a photoactivatable phenyl azide group, providing specific, directed coupling at one end and nonselective insertion capability at the other end. 

Figure 5.25 The reaction of sulfo-SAPB with an amine group is done first to form an amide bond derivative through its NHS ester end. Subsequent exposure to UV light causes the phenyl azide group to ring-expand to a highly reactive dehydroazepine, which can couple to nucleophiles, such as amines.

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