Substrate-block interactions

A number of researchers have used surface energy libraries to examine the self-assembly of block copolymer species in thin films. It is well known that substrate-block interactions can govern the orientation, wetting symmetry and even the pattern motif of self-assembled domains in block copolymer films [29]. A simple illustration of these effects in diblock copolymer films is shown schematically in Fig. 6. However, for most block copolymer systems the exact surface energy conditions needed to control these effects are unknown, and for many applications of self-assembly (e.g., nanolithography) such control is essential. 

Competitive, reversible inhibitors bind the active site of the enzyme and therefore block substrate-enzyme interactions. The inhibitor (I) and substrate may not bind simultaneously (Scheme 4.11). In something of a chemical love triangle, the enzyme s binding ability is split between two molecules, the substrate and inhibitor. Therefore, the effective affinity of the enzyme for the substrate alone drops. Km of the substrate will A... 

From its beginning in the late 1990s, DSA of block copolymers has grown into an active research area over the past decade. As shown above, block copolymer self-assembly on patterned substrates promises a facile route to nanoscopic patterns for future fabrications. Even though precise registration of block copolymer domains and simulation of complicated substrate-polymer interaction have been demonstrated, many challenges and opportunities await for more investigation in the future. 

Figure 11.11 Schematic diagrams of the specificity pockets of chymotrypsin, trypsin and elastase, illustrating the preference for a side chain adjacent to the scisslle bond In polypeptide substrates. Chymotrypsin prefers aromatic side chains and trypsin prefers positively charged side chains that can interact with Asp 189 at the bottom of the specificity pocket. The pocket is blocked in elastase, which therefore prefers small uncharged side chains.

The preferred substrates of acetyltransferases are amino-groups of antibiotics, like chloramphenicol, strepto-gramin derivatives, and the various aminoglycosides. The modification is believed to block a functional group involved in the drug-target-interaction. All acetyltransferases use acetyl-coenzyme A as cofactor. 

Fig. 9 Surface modification of cells with ssDNA-PEG-lipid. (a) Real-time monitoring of PEG-lipid incorporation into a supported lipid membrane by SPR. (r) A suspension of small unilamellar vesicles (SUV) of egg yolk lecithin (70 pg/mL) was applied to a CH3-SAM surface. A PEG-lipid solution (100 pg/mL) was then applied, (ii) Three types of PEG-lipids were compared PEG-DMPE (C14), PEG-DPPE (C16), and PEG-DSPE (C18) with acyl chains of 14, 16, and 18 carbons, respectively, (b) Confocal laser scanning microscopic image of an CCRF-CEM cell displays immobilized FITC-oligo(dA)2o hybridized to membrane-incorporated oligo(dT)20-PEG-lipid. (c) SPR sensorigrams of interaction between oligo(dA)2o-urokinase and the oligo (dT)2o-PEG-lipid incorporated into the cell surface, (i) BSA solution was applied to block nonspecific sites on the oligo(dT)20-incorporated substrate, (ii) Oligo(dA)20-urokinase (solid line) or oligo(dT)20-urokinase (dotted line) was applied...

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