Stereochemistry of chain

Figure 13 Stereochemistry of chain extension in erythromycin biosynthesis. DEBS 1-TE uses only the (25)-isomer of methylmalonyl-CoA to generate both a D- and an L-center in its lactone product. The D-methyl stereochemistry corresponds to condensation of (25)-methylmalonyl-CoA with retention of configuration, while the L-methyl corresponds to condensation with inversion.

Further targets for diversification are the nature and stereochemistry of chain extension. The choice of chain extension unit (whether malonyl-, methylmalonyl-, ethylmalonyl-, or propylmalonyl-CoA) is made by the acyltransferase (AT) do-... 

A second option is to displace all atoms in Cartesian coordinates and then run an optimization. This second option works well for ring systems, but is not so efficient for long chains. This may also result in changing the stereochemistry of the molecule. 

A mechanism in which the stereochemistry of the growing chain does exert an influence on the addition might exist, but at least two repeat units in the chain are required to define any such stereochemistry. Therefore this possibility is equivalent to the penultimate mechanism in copolymers. In this case the addition would be described in terms of conditional probabilities, just as Eq. (7.49) does for copolymers. Thus the probability of an isotactic triad controlled by the stereochemistry of the growing chain would be represented by the reaction... 

Proton chemical shift data from nuclear magnetic resonance has historically not been very informative because the methylene groups in the hydrocarbon chain are not easily differentiated. However, this can be turned to advantage if a polar group is present on the side chain causing the shift of adjacent hydrogens downfteld. High resolution C-nmr has been able to determine position and stereochemistry of double bonds in the fatty acid chain (62). Broad band nmr has also been shown useful for determination of soHd fat content. 

Cromakalim (137) is a potassium channel activator commonly used as an antihypertensive agent (107). The rationale for the design of cromakalim is based on P-blockers such as propranolol (115) and atenolol (123). Conformational restriction of the propanolamine side chain as observed in the cromakalim chroman nucleus provides compounds with desired antihypertensive activity free of the side effects commonly associated with P-blockers. Enantiomerically pure cromakalim is produced by resolution of the diastereomeric (T)-a-meth5lben2ylcarbamate derivatives. X-ray crystallographic analysis of this diastereomer provides the absolute stereochemistry of cromakalim. Biological activity resides primarily in the (—)-(33, 4R)-enantiomer [94535-50-9] (137) (108). In spontaneously hypertensive rats, the (—)-(33, 4R)-enantiomer, at dosages of 0.3 mg/kg, lowers the systoHc pressure 47%, whereas the (+)-(3R,43)-enantiomer only decreases the systoHc pressure by 14% at a dose of 3.0 mg/kg. 

A second hydride migration takes place, from C13 to C17, establishing the final 17/8 stereochemistry of the side chain. 

It is important to note here that both of the 5-exo radical cyclizations (133—>132—>131, Scheme 27) must proceed in a cis fashion the transition state leading to a strained mms-fused bicy-clo[3.3.0]octane does not permit efficient overlap between the singly occupied molecular orbital (SOMO) of the radical and the lowest unoccupied molecular orbital (LUMO) of the alkene. The relative orientation of the two side chains in the monocyclic radical precursor 134 is thus very significant because it dictates the relationship between the two outer rings (i. e. syn or anti) in the tricyclic product. The cis-anti-cis ring fusion stereochemistry of hirsutene would arise naturally from a cyclization precursor with trans-disposed side chain appendages (see 134). 

Photolysis of (Z)-3-phenyl-2-(2-phenylvinyl)-2//-azirine (1) in benzene solution yields 1-phenyl-3//-2-benzazepine (2) in excellent yield.39 However, the stereochemistry of the alkenyl side chain and the solvent used are important in determining the outcome of the reaction. For example, the E-isomer of the 2//-azirine 1 on photolysis in benzene solution yields 2,3-diphenyl-pyrrole as the major product (85 %) the pyrrole is also obtained on heating the Z- or E-isomer in benzene solution. In contrast, irradiation of the Z-isomer in methanol yields only acyclic products. 

The configuration of a center in radical polymerization is established in the transition state for addition of the next monomer unit when it is converted to a tetrahedral sp1 center. If the stereochemistry of this center is established at random (Scheme 4.1 km = k,) then a pure atactic chain is formed and the probability of finding a meso dyad, P(m), is 0.5. 

If the reaction center adopts a preferred configuration with respect to the configuration of the penultimate unit in the chain (Scheme 4.1 km kr) then Bernoullian statistics apply. The stereochemistry of the chain is characterized by the single parameter, P m) or P r) [= 1 The -ad concentrations can be... 

If the carbanion has even a short lifetime, 6 and 7 will assume the most favorable conformation before the attack of W. This is of course the same for both, and when W attacks, the same product will result from each. This will be one of two possible diastereomers, so the reaction will be stereoselective but since the cis and trans isomers do not give rise to different isomers, it will not be stereospecific. Unfortunately, this prediction has not been tested on open-chain alkenes. Except for Michael-type substrates, the stereochemistry of nucleophilic addition to double bonds has been studied only in cyclic systems, where only the cis isomer exists. In these cases, the reaction has been shown to be stereoselective with syn addition reported in some cases and anti addition in others." When the reaction is performed on a Michael-type substrate, C=C—Z, the hydrogen does not arrive at the carbon directly but only through a tautomeric equilibrium. The product naturally assumes the most thermodynamically stable configuration, without relation to the direction of original attack of Y. In one such case (the addition of EtOD and of Me3CSD to tra -MeCH=CHCOOEt) predominant anti addition was found there is evidence that the stereoselectivity here results from the final protonation of the enolate, and not from the initial attack. For obvious reasons, additions to triple bonds cannot be stereospecific. As with electrophilic additions, nucleophilic additions to triple bonds are usually stereoselective and anti, though syn addition and nonstereoselective addition have also been reported. 

The stereochemistry of the first step was ascertained by an X-ray analysis [8] of an isolated oxazaphospholidine 3 (R = Ph). The overall sequence from oxi-rane to aziridine takes place with an excellent retention of chiral integrity. As the stereochemistry of the oxirane esters is determined by the chiral inductor during the Sharpless epoxidation, both enantiomers of aziridine esters can be readily obtained by choosing the desired antipodal tartrate inductor during the epoxidation reaction. It is relevant to note that the required starting allylic alcohols are conveniently prepared by chain elongation of propargyl alcohol as a C3 synthon followed by an appropriate reduction of the triple bond, e. g., with lithium aluminum hydride [6b]. 

The conversion of long-chain alkanoate CoA esters into the alkenoate CoA esters by acyl-CoA oxidase involves an anti elimination reaction. The stereochemistry of the reaction in Candida lipolytica was established using stearoyl-CoA-labeled with H at the 2 R)-, 3(R)-, and 3(5)-positions (Kawaguchi et al. 1980). 

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