Single-cell Fourier transform mass

Instruments are available that can perform MS/MS type experiments using a single analyzer. These instruments trap and manipulate ions in a trapping cell, which also serves as the mass analyzer. The ion trap and fourier transform ion cyclotron resonance (FT-ICR) mass spectrometers are examples. 

Capillary electrophoresis (CE) either coupled to MS or to laser-induced fluorescence (LIF) is less often used in metabolomics approaches. This method is faster than the others and needs a smaller sample size, thereby making it especially interesting for single cell analysis [215] The most sensitive mass spectrometers are the Orbitrap and Fourier transform ion cyclotron resonance (FT-ICR) MS [213]. These machines determine the mass-to-charge ratio of a metabolite so accurate that its empirical formula can be predicted, making them the techniques of choice for the identification of unknown peaks. 

Hofstadler, S. A., Severs, J. C., Smith, R. D., Swanek, F. D., and Ewing, A. G. (1996). Analysis of single cells with capillary electrophoresis electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry. Rapid Commun. Mass Spectrom. 10, 919—922. 

An overview of commercial ICP mass spectrometers from different companies (quadrupole based ICP-MS with and without collision/reaction cell, double-focusing sector field instrumentation with single and multiple ion collectors, time-of-flight (ToF), ICP-ion trap-MS and non-commercial ICP-Fourier transform ion cyclotron resonance (FTICR) mass spectrometers is given in Figure 5.2. By using ion traps and FTICR mass spectrometers in ICP-MS isobaric interferences of atomic ions... 

Selected topics in Fourier-Transform Ion Cyclotron Resonance Mass Spectrometry instrumentation are discussed in depth, and numerous analytical application examples are given. In particular, optimization ofthe single-cell FTMS design and some of its analytical applications, like pulsed-valve Cl and CID, static SIMS, and ion clustering reactions are described. Magnet requirements and the software used in advanced FTICR mass spectrometers are considered. Implementation and advantages of an external differentially-pumped ion source for LD, GC/MS, liquid SIMS, FAB and LC/MS are discussed in detail, and an attempt is made to anticipate future developments in FTMS instrumentation. 

The best results are to be expected from stored waveform inverse Fourier transform (SWIFT) excitation [194]. First, the ideal excitation waveform is tailored to the needs of the intended experiment and then produced by an RF generator. SWIFT excitation also allows to remove ions of predefined m/z ranges from the ICR cell. This results in storage of a small m/z range, or after repeated SWIFT pulsing of a single nominal mass out of a broad band spectrum. Those ions are then accessible for ultrahigh resolution measurements or as precursors for tandem MS. 

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