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Simple sequence repeat polymorphisms

DNA polymorphisms useful In mapping human genes Include restriction fragment length polymorphisms (RFLPs), slngle-nucleotlde polymorphisms (SNPs), and simple sequence repeats (SSRs). [Pg.399]

Key Words Genotyping polymorphism single nucleotide polymorphism (SNP) simple sequence repeat (SSR) tandem repeat insertion deletion. [Pg.63]

Bowers, J.E., Dangl, G.S., Vignani, R., Meredith, C.P., 1996. Isolation and characterization of new polymorphic simple sequence repeat loci in grape (Vitis vinifera L.). Genome 39, 628-633. [Pg.59]

Bell, G. L, Selby, M. J., Rutter, W. J. (1982). The highly polymorphic region near the human insulin gene is composed of simple tandemly repeating sequences. Nature 295, 31-35. [Pg.248]

Potentially polymorphic novel VNTRs can be identified direcdy from genomic sequence using tools such as Tandem repeat finder (TRF) or Tandyman [17] (http //www.stdgen.lanl.gov/tandyman/docs/index.html). A complete analysis of microsatellites in the human genome sequence using both TRF and Tandyman has been presented in the UCSC human genome browser in the simple repeats and microsatellites tracks [7]. [Pg.96]

Roewer, L. and Epplen, J., Rapid and sensitive typing of forensic stains by PCR amplification of polymorphic simple repeat sequences in case work. Forensic Sci Int, 53, 163, 1992. [Pg.782]

Length polymorphism Length polymorphism comes in essentially four varieties, which for convenience I call i) small unique length variants ( 1 30 bp) ii) large insertions - usually transposable elements iii) length variants of simple di- or tri-nucleotide repeat sequences, and iv) minisatellite tandem repeat length variation. [Pg.23]


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