Seq-annot

Because the components of a Seq-aimot have specific references to locations on Bioseqs, the Seq-annot can stand alone or be exchanged with other scientists, and it need not reside in a sequence record. The scope of descriptors, on the other hand, does depend on where they are packaged. Thus, information about Bioseqs can be created, exchanged, and compared independently of the Bioseq itself. This is an important attribute of the Seq-annot and of the NCBl data model. 

Graphs are the third kind of annotation that can go into Seq-annots. A Seq-graph defines some continuous set of values over a defined interval on a Bioseq. It can be used to show properties like G -i- C content, surface potential, hydrophobicity, or base accmacy over the length of the sequence. 

United States Code Annotated, West Publishing Co., St. Paul, Minn. A compilation of U.S. laws of a general and permanent nature consisting of 50 Tides. Although many provisions of various Tides affect transportation. Tides 49 (Transportation) and 46 (Shipping) are of particular iaterest. Among other important statutes iacluded ia Tide 49 are the ICC Termination Act of 1995 ( 10101 et seql), the Department of Transportation Act ( 101 et seql), and the Hazardous Materials Transportation Act ( 5101 et seq.). Tide 46 collects various statutes pertaining primarily to water transportation. 

As a general trend, de novo transcriptome assembly studies reveal greater transcriptome complexity than expected and provide a blueprint for further studies. De novo transcriptome assembly of black pepper is a representative example of the application of SOLiD RNA-Seq technology in nonmodel species (29). In that study, 71 million short reads, representing a sequencing coverage per base (depth) of 62X, were used to assemble a total of 22,363 transcripts in root samples. Transcript and functional annotation was performed based on the sequence homology with other species. 

A Seq-aimot is a self-contained package of sequence annotations or information that refers to specific locations on specific Bioseqs. It may contain a feature table, a set of sequence aligmnents, or a set of graphs of attributes along the sequence. 

Farm other animal genomes Seq variation in chicken genome Mouse cDNA clone functional annotation Genomic align, annotation, exptl results Homologous genes in complete euk genomes... 

Poxvirus http //www.poxvims.org/ Poxvirus genomic seq, gene annotation... 

Bioverse http //bioverse.compbio.washington.edu Eunct and struct annotation of seq... 

New York Tort claims provisions. N.Y. Court Claims Article 2 Act Section 8 (1984). N.Y. General Municipal Law Section 50 (1909). N.Y. General Municipal Law Section 50 et seq. (McKinney Consolidated Laws of New York Annotated)... 

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