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Restriction site phylogenetic analysis

Choi, H.-K., and Wen, J. (2000). A phylogenetic analysis of Panax (Araliaceae) Integrating cpDNA restriction site and nuclear rDNA ITS sequence data. Plant Syst. Evol. 224, 109-120. [Pg.82]

More importantly, it is sometimes more informative. A very long nucleotide sequence may be required to provide more information than a restriction site survey. For example, a phylogenetic analysis of 22 taxa from the sunflower family used both restriction site variation in chloroplast DNA and nucleotide sequence variation in the chloroplast-encoded gene rbcL.5 The restriction site survey identified 583 variable sites of which 169 were shared between two or more taxa, whereas the sequence survey found only 109 shared variable positions. Even though the restriction site survey included only 11 enzymes, nearly 3500 nucleotides are included in the variable sequences surveyed, whereas rbcL is only 1428 base pairs (bp) in length. [Pg.440]

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Phylogenetic

Phylogenetic analysis

Phylogenetic analysis restriction site data

Phylogenetics

Restriction analysis

Restriction site analysis

Restriction sites

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