Pores, dynamic

Finley MF, Scheller RH, Madison DV (2003) SNAP-25 Seri 87 does not mediate phorbol ester enhancement of hippocampal synaptic transmission. Neuropharmacology 45 857-62 Fisher RJ, Pevsner J, Burgoyne RD (2001) Control of fusion pore dynamics during exocytosis by Muncl8. Science 291 875-8... 

A full comparison of the two discussed zeolite structures and the adsorption properties based on parameters influencing the zeolite pore dynamics are given in Table 4 Table 4 Specifications, parameters of relevance to the deformation of framework, framework dynamics and adsorption properties of zeolite-types MFI and RHO ... 

Tieleman, D.P., Berendsen, H.J.C. A molecular dynamics study of the pores formed by E. coli OmpF porin in a fully hydrated POPE bilayer. Biophys. J., in print (1998). 

Marrink, S.J., Jahnig, F., Berendsen, H.J.C. Proton transport across transient single-file water pores in a lipid membrane studied by molecular dynamics simulations. Biophys. J. 71 (1996) 632-647. 

Thus dynamic tests will be influenced by the existence of the dead-end pores and, in principle, they offer the possibility of obtaining quantitative inforiuation on diffusion in these pores. 

Two different types of dynamic test have been devised to exploit this possibility. The first and more easily interpretable, used by Gibilaro et al [62] and by Dogu and Smith [63], employs a cell geometrically similar to the Wicke-Kallenbach apparatus, with a flow of carrier gas past each face of the porous septum. A sharp pulse of tracer is injected into the carrier stream on one side, and the response of the gas stream composition on the other side is then monitored as a function of time. Interpretation is based on the first two moments of the measured response curve, and Gibilaro et al refer explicitly to a model of the medium with a blmodal pore... 

Liquid holdup is made up of a dynamic fraction, 0.03 to 0.25, and a stagnant fraction, 0.01 to 0.05. The high end of the stagnant fraction includes the hquid that partially fills the pores of the catalyst. The effective gas/liquid interface is 20 to 50 percent of the geometric surface of the particles, but it can approach 100 percent at high hquid loads with a consequent increase of reaction rate as the amount of wetted surface changes. 

J. J. Magda, M. Tirell, H. T. Davis. Molecular dynamics of narrow, liquid-filled pores. J Chem Phys 55 1888-1901, 1985. 

Among the dynamical properties the ones most frequently studied are the lateral diffusion coefficient for water motion parallel to the interface, re-orientational motion near the interface, and the residence time of water molecules near the interface. Occasionally the single particle dynamics is further analyzed on the basis of the spectral densities of motion. Benjamin studied the dynamics of ion transfer across liquid/liquid interfaces and calculated the parameters of a kinetic model for these processes [10]. Reaction rate constants for electron transfer reactions were also derived for electron transfer reactions [11-19]. More recently, systematic studies were performed concerning water and ion transport through cylindrical pores [20-24] and water mobility in disordered polymers [25,26]. 

Recently, many experiments have been performed on the structure and dynamics of liquids in porous glasses [175-190]. These studies are difficult to interpret because of the inhomogeneity of the sample. Simulations of water in a cylindrical cavity inside a block of hydrophilic Vycor glass have recently been performed [24,191,192] to facilitate the analysis of experimental results. Water molecules interact with Vycor atoms, using an empirical potential model which consists of (12-6) Lennard-Jones and Coulomb interactions. All atoms in the Vycor block are immobile. For details see Ref. 191. We have simulated samples at room temperature, which are filled with water to between 19 and 96 percent of the maximum possible amount. Because of the hydrophilicity of the glass, water molecules cover the surface already in nearly empty pores no molecules are found in the pore center in this case, although the density distribution is rather wide. When the amount of water increases, the center of the pore fills. Only in the case of 96 percent filling, a continuous aqueous phase without a cavity in the center of the pore is observed. 

A. Milchev, K. Binder. Dynamics of polymer chains confined in slit-like pores. J Physique 7/5 21-31, 1996. 

The competitive adsorption isotherms were determined experimentally for the separation of chiral epoxide enantiomers at 25 °C by the adsorption-desorption method [37]. A mass balance allows the knowledge of the concentration of each component retained in the particle, q, in equilibrium with the feed concentration, < In fact includes both the adsorbed phase concentration and the concentration in the fluid inside pores. This overall retained concentration is used to be consistent with the models presented for the SMB simulations based on homogeneous particles. The bed porosity was taken as = 0.4 since the total porosity was measured as Ej = 0.67 and the particle porosity of microcrystalline cellulose triacetate is p = 0.45 [38]. This procedure provides one point of the adsorption isotherm for each component (Cp q. The determination of the complete isotherm will require a set of experiments using different feed concentrations. To support the measured isotherms, a dynamic method of frontal chromatography is implemented based on the analysis of the response curves to a step change in feed concentration (adsorption) followed by the desorption of the column with pure eluent. It is well known that often the selectivity factor decreases with the increase of the concentration of chiral species and therefore the linear -i- Langmuir competitive isotherm was used ... 

FIGURE 1 Effect of (sequential) extrusion of MLV dispersions through polycarbonate membrane filters (Unipore) with pore sizes of 1.0, 0.6, 0.4, 0.2, and 0.1 ym on the mean liposome diameter. DXR-containing MLV (phosphatidylcholine/phosphatidylserine/ cholesterol 10 1 4) mean diameter of nonextruded dispersion about 2 ym pH 4. Mean particle size determined by dynamic Light scattering (Nanosizer, Coulter Electronics). (From Crommelin and Storm, 1987.)... 

Equilibrium Systems. Magda et al (12.) have carried out an equilibrium molecular dynamics (MD) simulation on a 6-12 Lennard-Jones fluid In a silt pore described by Equation 41 with 6 = 1 with fluid particle Interactions given by Equation 42. They used the Monte Carlo results of Snook and van Me gen to set the mean pore density so that the chemical potential was the same In all the simulations. The parameters and conditions set In this work were = 27T , = a, r = 3.5a, kT/e = 1.2, and... 

To compare molecular theoretical and molecular dynamics results, we have chosen the same wall-particle potential but have used the 6 - oo fluid particle potential. Equation 14, Instead of the truncated 6-12 LJ potential. This Is done because the molecular theory Is developed In terms of attractive particles with hard sphere cores. The parameter fi n Equation 8 Is chosen so that the density of the bulk fluid In equilibrium with the pore fluid Is the same, n a = 0.5925, as that In the MD simulations. 

Molecular dynamics results for restricted pore average density versus pore width. 

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