Pentose catabolism

Pyruvate-dependent lyases serve catabolic functions in vivo in the degradation of sialic acids and KDO (2-keto-3-deoxy-manno-octosonate), and in that of 2-keto-3-deoxy aldonic acid intermediates from hexose or pentose catabolism. 

In vivo, pyruvate lyases perform a catabolic function. The synthetically most interesting types are those involved in the degradation of sialic acids or the structurally related octulosonic acid KDO, which are higher sugars typically found in mammalian or bacterial glycoconjugates [62-64], respectively. Also, hexose or pentose catabolism may proceed via pyruvate cleavage from intermediate 2-keto-3-deoxy derivatives which result from dehydration of the corresponding aldonic acids. Since these aldol additions are freely reversible, the often unfavourable equilibrium constants require that reactions in the direction of synthesis have to be driven by an excess of one of the components, preferably pyruvate for economic reasons, in order to achieve a satisfactory conversion. 

FIG. 10. —Possible Routes of Pentitol and Pentose Catabolism by Yeasts (after Barnett903). 

Various microbes including filamentous fungi and yeasts have a pentose catabolism involving phosphoketolase (PK), which is called the PK pathway . In addition, heterofermentative lactic acid bacteria including the genera... 

Phosphoketolase is involved in special types of pentose catabolism of fungi and yeasts, and the central fermentative pathway of commensal heterofermentative lactic acid bacteria. 

Engineering the Pentose Catabolic Pathways forD-Xylose and L-Arabinose... 

Engineering the Pentose Catabolic Pathway for Hemicellulase Overexpression... 

Vnother pathway of glucose catabolism, the pentose phosphate pathway, is the primary source of N/ E)PH, the reduced coenzyme essential to most reductive biosynthetic processes. For example, N/VDPH is crucial to the biosynthesis of... 

One of the steps in the pentose phosphate pathway for glucose catabolism is the reaction of sedoheptulose 7-phosphate with glyceraldehyde 3-pho phate in the presence of a transaldolase to yield erythrose 4-phosphate and fructose 6-phosphate. 

There is known one more catabolic route for carbohydrates commonly referred to as the pentose phosphate cycle (also called hexose mono phosphate shunt, or phosphogluconate pathway). 

As a general rule, NAD+ is associated with catabolic reactions and it is somewhat unusual to find NADP+ acting as an oxidant. However, in mammals the enzymes of the pentose phosphate pathway are specific for NADP+. The reason is thought to lie in the need of NADPH for biosynthesis (Section I). On this basis, the occurrence of the pentose phosphate pathway in tissues having an unusually active biosynthetic function (liver and mammary gland) is understandable. 

Fig. 8.2 Glycolysis and related pathways. Glycolysis is a central metabolic machinery in which one mole of glucose is catabolized to two moles of pyruvate, NADH, and ATP. Under aerobic conditions, pyruvate is further oxidized by mitochondrial system. In erythrocytes DHAP is a dead-end product however, in brain it can be converted into direction of lipid synthesis. Glycolysis and the pentose phosphate pathway (pentosePP) are interconnected via fructose-6-P and glyceral-dehyde-3-P. A high level of NADPH favors lipid synthesis via pentose phosphate shunt (pentosePP). At TPI inhibition (TPI deficiency), glyceraldehyde-3-Pcan be produced via G6PDH as well, to contribute to the glycolytic flux. a-GDH catalyzes the...

The second stage of the pentose phosphate pathway is the nonoxidative, reversible metabolism of five-carbon phosphosugars into phosphorylated three-carbon and six-carbon glycolytic intermediates. Thus, the nonoxidative branch can either introduce riboses into glycolysis for catabolism or generate riboses from glycolytic intermediates for biosyntheses. 

Fig. 1. Pathways of glucose metabolism in eubacteria and eukaryotes. The three major catabolic pathways are the Embden-Meyerhof glycolytic sequence (solid lines), the Entner-Doudoroff pathway (heavy solid lines) and the pentose phosphate pathway (dashed lines). The sequence from glyceraldehyde 3-phosphate to pyruvate is common to all three pathways.

While the main function of glycolysis is to produce ATP, there are minor catabolic pathways that produce specialized products for cells. One, the pentose phosphate pathway, produces NADPH and the sugar ribose 5-phosphate. NADPH is used to reduce substrates in the synthesis of fatty acids, and ribose 5-phosphate is used in the synthesis of nucleic acids. 

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