Organic molecules molecular orbitals

Chapter 1 reviews the topics from general chemistry that will be important to your study of organic chemistry. The chapter starts with a description of the structure of atoms and then proceeds to a description of the structure of molecules. Molecular orbital theory is introduced. Acid-base chemistry, which is central to understanding many organic reactions, is reviewed. You will see how the structure of a molecule affects its acidity and how the acidity of a solution affects molecular structure. 

The second broad approach to the description of molecular structure that is of importance in organic chemistry is molecular orbital theory. Molecular orbital (MO) theory discards the idea that bonding electron pairs are localized between specific atoms in a molecule and instead pictures electrons as being distributed among a set of molecular orbitals of discrete energies. In contrast to the orbitals described by valence bond theory, which are usually concentrated between two specific atoms, these orbitals can extend over the entire molecule. Molecular orbital theory is based on the Schrodinger equation,... 

Flehre W J, Ditchfieid R and Popie J A 1972 Self-consistent molecular-orbital methods XII. Further extension of Gaussian-type basis sets for use in molecular orbital studies of organic molecules J. Chem. Phys. 56 2257-61 Flariharan P C and Popie J A 1973 The influence of polarization functions on molecular orbital hydrogenation energies Theoret. Chim. Acta. 28 213-22... 

MMVB is a hybrid force field, which uses MM to treat the unreactive molecular framework, combined with a valence bond (VB) approach to treat the reactive part. The MM part uses the MM2 force field [58], which is well adapted for organic molecules. The VB part uses a parametrized Heisenberg spin Hamiltonian, which can be illustrated by considering a two orbital, two electron description of a sigma bond described by the VB determinants... 

We will use the valence bond approach extensively m our discussion of organic molecules and expand on it shortly First though let s introduce the molecular orbital method to see how it uses the Is orbitals of two hydrogen atoms to generate the orbitals of an H2 molecule... 

Molecular orbital calculations indicate that cyclo C-18 carbyne should be relatively stable and experimental evidence for cyclocarbynes has been found [25], Fig. 3B. Diederich et al [25] synthesised a precursor of cyclo C-18 and showed by laser flash heating and time-of flight mass spectrometry that a series of retro Diels-Alder reactions occurred leading to cyclo C-18 as the predominant fragmentation pattern. Diederich has also presented a fascinating review of possible cyclic all-carbon molecules and other carbon-rich nanometre-sized carbon networks that may be susceptible to synthesis using organic chemical techniques [26]. 

Self-Consistent Molecular-Orbital Methods IX. An Extended Gaussian-Type Basis for Molecular-Orbital Studies of Organic Molecules R. Ditchfield, W. J. Hehre and J. A. Pople The Journal of Chemical Physics 54 (1971) 724-728... 

The delocalization of molecular orbitals lies at the heart of modern chemistry. The concept that the tt orbitals of benzene or naphthalene cover the entire carbon skeleton promoted the successful understanding of conjugated molecules. The work of R. Hoffmann and others has proven that in saturated molecules [Pg.1]

In the present work a theory for the facile construction of complex molecular orbitals from bond and group orbitals is presented and complemented by accurate drawings of the valence molecular orbitals for over one hundred molecules representing a wide range of connectivities and functional groupings. Direct applications to phenomena in organic chemistry are also discussed. 

Unsaturated organic molecules, such as ethylene, can be chemisorbed on transition metal surfaces in two ways, namely in -coordination or di-o coordination. As shown in Fig. 2.24, the n type of bonding of ethylene involves donation of electron density from the doubly occupied n orbital (which is o-symmetric with respect to the normal to the surface) to the metal ds-hybrid orbitals. Electron density is also backdonated from the px and dM metal orbitals into the lowest unoccupied molecular orbital (LUMO) of the ethylene molecule, which is the empty asymmetric 71 orbital. The corresponding overall interaction is relatively weak, thus the sp2 hybridization of the carbon atoms involved in the ethylene double bond is retained. 

The n molecular orbitals described so far involve two atoms, so the orbital pictures look the same for the localized bonding model applied to ethylene and the MO approach applied to molecular oxygen. In the organic molecules described in the introduction to this chapter, however, orbitals spread over three or more atoms. Such delocalized n orbitals can form when more than two p orbitals overlap in the appropriate geometry. In this section, we develop a molecular orbital description for three-atom n systems. In the following sections, we apply the results to larger molecules. 

Hehre, W. J., Ditchfield, R., Pople, J. A., 1972, Self-Consistent Molecular Orbital Methods. XII. Further Extensions of Gaussian-Type Basis Sets for Use in Molecular Orbital Studies of Organic Molecules J. Chem. Phys., 56, 2257. 

Other approximate, more empirical methods are the extended Huckel 31> and hybrid-based Hiickel 32. 3> approaches. In these methods the electron repulsion is not taken into account explicitly. These are extensions of the early Huckel molecular orbitals 4> which have successfully been used in the n electron system of planar molecules. On account of the simplest feature of calculation, the Hiickel method has made possible the first quantum mechanical interpretation of the classical electronic theory of organic chemistry and has given a reasonable explanation for the chemical reactivity of sizable conjugated molecules. 

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