Nucleophile activation

In the strongly basic medium, the reactant is the phenoxide ion high nucleophilic activity at the ortho and para positions is provided through the electromeric shifts indicated. The above scheme indicates theorpara substitution is similar. The intermediate o-hydroxybenzal chloride anion (I) may react either with a hydroxide ion or with water to give the anion of salicyl-aldehyde (II), or with phenoxide ion or with phenol to give the anion of the diphenylacetal of salicylaldehyde (III). Both these anions are stable in basic solution. Upon acidification (III) is hydrolysed to salicylaldehyde and phenol this probably accounts for the recovery of much unreacted phenol from the reaction. 

Such calculations have been made also for pyrimidines of biological interest (B-60MI21302). That for uracil (5) is interesting in that a figure of -0.22 is assigned to the 5-position, compared with almost zero in pyrimidine this immediately explains the ease of electrophilic attack at the 5-position of uracil as well as the lack of nucleophilic activity at the same position. 

Pyrazine and quinoxaline fV-oxides generally undergo similar reactions to their monoazine counterparts. In the case of pyridine fV-oxide the ring is activated both towards electrophilic and nucleophilic substitution reactions however, pyrazine fV-oxides are generally less susceptible to electrophilic attack and little work has been reported in this area. Nucleophilic activation generally appears to be more useful and a variety of nucleophilic substitution reactions have been exploited in the pyrazine, quinoxaline and phenazine series. 

In 1965, Breslow and Chipman discovered that zinc or nickel ion complexes of (E)-2-pyridinecarbaldehyde oxime (5) are remarkably active catalyst for the hydrolysis of 8-acetoxyquinoline 5-sulfonate l2). Some years later, Sigman and Jorgensen showed that the zinc ion complex of N-(2-hydroxyethyl)ethylenediamine (3) is very active in the transesterification from p-nitrophenyl picolinate (7)13). In the latter case, noteworthy is a change of the reaction mode at the aminolysis in the absence of zinc ion to the alcoholysis in the presence of zinc ion. Thus, the zinc ion in the complex greatly enhances the nucleophilic activity of the hydroxy group of 3. In search for more powerful complexes for the release of p-nitrophenol from 7, we examined the activities of the metal ion complexes of ligand 2-72 14,15). 

In contrast, Cozzi and Umani-Ronchi found the (salen)Cr-Cl complex 2 to be very effective for the desymmetrization of meso-slilbene oxide with use of substituted indoles as nucleophiles (Scheme 7.25) [49]. The reaction is high-yielding, highly enantioselective, and takes place exclusively at sp2-hybridized C3, independently of the indole substitution pattern at positions 1 and 2. The successful use of N-alkyl substrates (Scheme 7.25, entries 2 and 4) suggests that nucleophile activation does not occur in this reaction, in stark contrast with the highly enantioselective cooperative bimetallic mechanism of the (salen)Cr-Cl-catalyzed asymmetric azidolysis reaction (Scheme 7.5). However, no kinetic studies on this reaction were reported. 

So far, many kinds of nucleophiles active for hydrolysis such as imidazolyl-, amino-, pyridino-, carboxyl- and thiol-groups, have been used for preparation of hydrolase models. Overberger et al.108,1091 prepared copolymers of vinylimidazole and acrylic acid 60 (PVIm AA), by which the cationic substrate, 61 (ANTI), was hydrolyzed. This kind of copolymer is considered to be a model of acetylcholinesterase. With ANTI, the rate of the copolymer catalysis was higher than that of imidazole itself in the higher values of pH, as is seen in Table 9. In this work, important contributions of the electrostatic interactions are clear. The activity of the copolymer was not as high with the negatively charged and neutral substrates. 

Figure 7-7. Catalysis by chymotrypsin. The charge-relay system removes a proton from Ser 195, making it a stronger nucleophile. Activated Ser 195 attacks the peptide bond, forming a transient tetrahedral intermediate. Release of the amino terminal peptide is facilitated by donation of a proton to the newly formed amino group by His 57 of the charge-relay system, yielding an acyl-Ser 195 intermediate. His 57 and Asp 102 collaborate to activate a water molecule, which attacks the acyl-Ser 195, forming a second tetrahedral intermediate. The charge-relay system donates a proton to Ser 195, facilitating breakdown of tetrahedral intermediate to release the carboxyl terminal peptide .

The HKR reactions follow the cooperative bimetallic catalysis where epoxide and nucleophile activate simultaneously by two different (salen)Co-AlX3 catalyst molecules. The linking of two (salen)Co unit through the A1 induces the cooperative mechanism, albeit through a far less enantio-discriminating transition state than that attained with the catalyst la and la (Scheme2). 

This work has been extended to transesterification with secondary alcohols [23], and of phosphonate esters [24], Movassaghi and co-workers have demonstrated that NHCs effectively catalyse the amidation of esters with amino alcohols, although an alternative mechanism involving the NHC acting as a Brpnsted base, resulting in nucleophilic activation of the alcohol for an initial transesterification event, followed by rapid O- to iV-acyl transfer, has been proposed [25, 26],... 

ABPP is only applicable to targets that possess a nucleophilic active-site residue (Ser, Cys, Lys) susceptible to covalent labeling by an electrophile. When this is lacking, an alternative is to add a photoaffinity group to an inhibitor scaffold so that a covalent adduct with the target can be created by exposure to UV light. 

Organogermanium compounds resemble their organosilicon analogues in their reactivity in crosscoupling reactions, and require nucleophilic activation (Section 9.6.3.2 2)... 

Alternatively, the transmetalation can be facilitated by increasing the nucleophilicity of the carbon nucleophile participating in the cross-coupling, which is most often done by increasing the electron density on the metal by coordination of extra anionic ligands. Two distinct approaches to nucleophilic activation are (i) the addition of appropriate Lewis bases to the reaction mixture (nucleophilic catalysis) or (ii) the use of a preformed, electron-rich, organo-metallic reagent with enhanced nucleophilicity. 

Benzyl and triphenylmethyl ethers of carbohydrates are preferred over methyl ethers when selective removal of protecting groups is important. The relatively high nucleophilic activity of the 5-hydroxyl group in glycosides and 1,2-O-alkylidene derivatives of 4 permits its benzylation and triphenylmethylation under mild conditions. Thus, treatment of 33 (Ref. 34) and 36 (Ref. 57) with benzyl bromide and... 

We have also developed targeted library approaches towards cysteine proteases, which are important pharmaceutical targets due to their role in the pathogenesis of many diseases.1251 A common feature of virtually all cysteine protease inhibitors is an electrophilic functionality, such as a carbonyl or a Michael acceptor, which can react with the nucleophilic active site cysteine residue. We specifi-... 

The polymers used in this study were prepared by a nucleophilic activated aromatic substitution reaction of a bisphenate and dihalo diphenyl sulfone ( ). The reaction was carried out in an aprotic dipolar solvent (NMP) at 170°C in the presence of potassium carbonate (Scheme 1) (5,6). The polymers were purified by repeated precipitation into methanol/water, followed by drying to constant weight. The bisphenols used were bisphenol-A (Bis-A), hydroquinone (Hq) and biphenol (Bp). Thus, the aliphatic character of Bis-A could be removed while retaining a similar aromatic content and structure. The use of biphenol allows an investigation of the possible effect of extended conjugation on the radiation degradation. 

Two patterns are possible in the activation mechanism by simple chiral Lewis base catalysts. One is through the activation of nucleophiles such as aUyltrichlorosilanes or ketene trichlorosilyl acetals via hypervalent silicate formation using organic Lewis bases such as chiral phosphoramides or A-oxides. " In this case, catalysts are pure organic compounds (see Chapter 11). The other is through the activation of nucleophiles by anionic Lewis base conjugated to metals. In this case, transmetal-lation is the key for the nucleophile activation. This type of asymmetric catalysis is the main focus of this section. 

A method using dual activation has been developed in which a Lewis acid activates the aldehyde with concomitant nucleophilic activation of the allylic silicon reagent with fluoride anion. Thus, by using a BINOL-based titanium... 

Scheme 5.24 Addition of carbo-nucleophile active methylene compound.

Here is another case where nucleophilic activation by a methoxyl group is necessary for cyclization, and this initiates the attack upon the heterocycle at C-3 and hence the formation of the rrt/rt.v-fused letracycle (this is more stable than the cis alternative). 

Pyridine 1-oxide is remarkable in that it reacts easily with both electrophiles (as its free base) and nucleophiles. Activation toward electrophilic attack (at C-4) derives from donation of a pair of electrons by the iV-oxide oxygen and the involvement of a relatively stable Wheland intermediate (20) (equation 3). 

Benzylic halides and sulfonates show a wide range of reactivity towards nucleophiles. Activation and deactivation by o-/p-donors (e.g. OR) and acceptors (e.g. N02), respectively, are consistent with PAR. In each case the benzylic carbon atom is identified as acceptor or donor. The trends are also reflected in the relative acidities of the corresponding toluene derivatives. 

Gold has even shown its ability as a nucleophile activator in three-component reactions of terminal alkynes, aldehydes and amines [186]. In the case of chiral amines, excellent diastereoselectivities were obtained [187] (Scheme 8.29). ... 

D. Herschlag, D. Nucleophilic activation by positioning in phosphoryl transfer catalyzed by nucleoside diphosphate kinase. Biochemistry, 38, 4701-4711 (1999)... 

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