NMR - Structural Information

As a complete structural elucidation of complex glycosidic compounds cannot be achieved by one-dimensional H-NMR spectra, which are provided by on-flow LC-NMR (13C-NMR data are still required for an unambiguous assignment of resonances), two approaches have proven to be effective in the case of asterosaponins in order to identify new compounds for a subsequent semi-preparative isolation  

25 ppm appears, while in those without one a doublet between 0.8 and 0.9 ppm appears. However, the H3-2I methyl resonances sometimes overlap with other signals. 

The comparison of sub-spectra of unknowns with those of known compounds or with those of other unknowns in order to recognise structural analogies or differ- 

Solid frame olefinic resonance at 6.2 ppm indicates a double bond in the side-chain in the vicinity of a carbonyl function 

Dashed frames identical sugar methyl resonances 

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Physical, chemical, and biological properties are related to the 3D structure of a molecule. In essence, the experimental sources of 3D structure information are X-ray crystallography, electron diffraction, or NMR spectroscopy. For compounds without experimental data on their 3D structure, automatic methods for the conversion of the connectivity information into a 3D model are required (see Section 2.9 of this Textbook and Part 2, Chapter 7.1 of the Handbook) [16]. 

A particularly good selection of physical properties may be spectra, because they are known to depend strongly on the chemical structure. In fact, different types of spectra carry different kinds of structural information, NMR spectra characterize individual carbon atoms in their molecular environment. They therefore correspond quite closely to fragment-based descriptors, as underlined by the success of approaches to predict NMR spectra by fragment codes (see Section 10.2.3). 

In contrast to IR and NMR spectroscopy, the principle of mass spectrometry (MS) is based on decomposition and reactions of organic molecules on theii way from the ion source to the detector. Consequently, structure-MS correlation is basically a matter of relating reactions to the signals in a mass spectrum. The chemical structure information contained in mass spectra is difficult to extract because of the complicated relationships between MS data and chemical structures. The aim of spectra evaluation can be either the identification of a compound or the interpretation of spectral data in order to elucidate the chemical structure [78-80],... 

We pointed out in Section 13 3 that both H and are nuclei that can provide useful structural information when studied by NMR Although a H NMR spectrum helps us infer much about the carbon skeleton of a molecule a NMR spectrum has the obvious advantage of probing the carbon skeleton directly NMR spectroscopy is analogous to H NMR in that the number of signals informs us about the number of different kinds of carbons and their chemical shifts are related to particular chemical environments... 

Section 13 6 In addition to chemical shift an H NMR spectrum provides structural information based on... 

Section 13 19 2D NMR techniques are enhancements that are sometimes useful m gam mg additional structural information A H H COSY spectrum reveals which protons are spin coupled to other protons which helps m deter mining connectivity A HETCOR spectrum shows the C—H connections by correlating C and H chemical shifts... 

A second type of structural information can be deduced from the hyperfine splitting in EPR spectra. The origin of this splitting is closely related to the factors that cause spin-spin splitting in proton NMR spectra. Certain nuclei have a magnetic moment. Those which are of particular interest in organic chemistry include H, " N, F, and P. 

Spectrometers are designed to measure the absorption of electromagnetic radiation by a sample. Basically, a spectrometer consists of a source of radiation, a compartment containing the sfflnple through which the radiation passes, and a detector. The frequency of radiation is continuously varied, and its intensity at the detector is compar ed with that at the source. When the frequency is reached at which the sample absorbs radiation, the detector senses a decrease in intensity. The relation between frequency and absorption is plotted as a spectrum, which consists of a series of peaks at characteristic frequencies. Its interpretation can furnish structural information. Each type of spectroscopy developed independently of the others, and so the data format is different for each one. An NMR spectrum looks different from an IR spectrum, and both look different from a UV-VIS spectrum. 

Phosphorus has only one stable isotope, J P, and accordingly (p. 17) its atomic weight is known with extreme accuracy, 30.973 762(4). Sixteen radioactive isotopes are known, of which P is by far the most important il is made on the multikilogram scale by the neutron irradiation of S(n,p) or P(n,y) in a nuclear reactor, and is a pure -emitter of half life 14.26 days, 1.7()9MeV, rntan 0.69MeV. It finds extensive use in tracer and mechanistic studies. The stable isotope has a nuclear spin quantum number of and this is much used in nmr spectroscopy. Chemical shifts and coupling constants can both be used diagnostically to determine structural information. 

Various destructive and non-destructive methods of analysis have been tested and H-l and C-13 NMR have, among other techniques provided valuable structural information on soluble humic acids and fulvic acids 48, Humin, on the other hand has withstood detailed non-destructive analysis. 

Clusters Fa and Fb of photosystem I from cyanobacteria and chloro-plasts are distinguished by their EPR signatures (26, 27) and their reduction potentials (-520 mV for Fa and -580 mV for Fb Ref. (28). The assignment of cysteines in the primary sequence as ligands to individual clusters has been achieved by site-specific mutagenesis (29, Fig. 3), and structural information with regard to the environment of both clusters has been obtained by NMR (24). 

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