Molecular dimensions, water molecule

As well as occurring naturally, alumino-silicates are manufactured. Their structure is that of a framework of silicon, aluminium and oxygen atoms. If the framework contains water, then this may be driven off by heating, leaving a porous structure, access to which is controlled by windows of precise molecular dimensions. Larger molecules are excluded, hence the description molecular sieve as discussed in Chapter 17. 

Dj IE, ratio of a crack is held constant but the dimensions approach molecular dimensions, the crack becomes more retentive. At room temperature, gaseous molecules can enter such a crack direcdy and by two-dimensional diffusion processes. The amount of work necessary to remove completely the water from the pores of an artificial 2eohte can be as high as 400 kj/mol (95.6 kcal/mol). The reason is that the water molecule can make up to six H-bond attachments to the walls of a pore when the pore size is only slightly larger. In comparison, the heat of vaporization of bulk water is 42 kJ /mol (10 kcal/mol), and the heat of desorption of submonolayer water molecules on a plane, soHd substrate is up to 59 kJ/mol (14.1 kcal/mol). The heat of desorption appears as a exponential in the equation correlating desorption rate and temperature (see Molecularsieves). 

In non-viscous organic solvents the fluorescence efficiency of most SNA derivatives is comparable to that of TS as are the yields of trans to ois photoisomerization (33,3A). The double chain derivatives, MSNA and MSN, show substantially higher fluorescence yields (0.2 0.02) in non-viscous solvents with a corresponding decrease in the trans to ois isomerization efficiency (3A). In the sensitized isomerization, the MSN derivatives investigated thus far show only photoisomerization but there is an increase in the triplet lifetime by a factor of 2 however there is no change in the decay ratio of the isomerization precursor and the sum of the benzophenone sensitized isomerization efficiencies of ASA is approximately unity. When water insoluble SNA or MSNA molecules are spread as a film, either pure or in mixtures with insoluble fatty acids, at the air-water interface, it is found that the films show comparable behavior on compression to those of pure fatty acid with an indicated area per molecule of the surfactant stilbenes very close to that of a linear fatty acid (oa. 202 /molecule) (35). This suggests strongly that the TS chromophore in these molecules offers suitable molecular dimensions to pack into a crystalline-like array of linear parafin chains. 

Atomistic MD models can be extended to the coarse-grained level introduced in the previous section, which is determined by the dimension of the backbone chain and branch. For the precise description of water molecular behavior, simple point charge (SPC) model was adopted (Krishnan et al., 2001), which can be used to simulate complex composition systems and quantitatively express vibrational spectra of water molecules in vapor, liquid, and solid states. The six-parameter (Doh, o , fi, Lye, Lyy, and Lee) SPC potential used for the water molecules is shown in Equation (24) ... 

In principle, isotherms at low partial pressures of the sorbate may be used to determine specific surface areas by the Brunauer-Emmett-Teller (BET) method (G64). In this method, it is assumed that molecules of the sorbate are adsorbed on surfaces that can include the walls of pores, provided that the distance between molecules on opposing walls is large compared with molecular dimensions. From a plot derived from the isotherm, and given the effective cross-sectional area of the sorbate molecule, the specific surface area of the sorbent and the net heat of adsorption are obtained. Using water as sorbate, specific surface areas of about 200 m per g of D-dried paste have typically been obtained for mature cement pastes of normal w/c ratios... 

The term molecular sieve describes a material having pores that closely match the dimensions of a specific molecule. The best-known molecular sieves are composites of microcrystalline zeolites embedded in an inert clay binder. Zeolites are composed of regular clusters of tetrahedral aluminosilicates, with varying percentages of bound cations and water molecules, whose crystal structures incorporate small molecule-sized cavities. Because zeolite pore size is different for each of the numerous different crystal structures in this family, the size-selective nature can be tailored for specific applicatimis. Studies of the transport of liquid and gaseous organic species in molecular sieves indicate that the diffusion rate and equilibrium concentration of sorbed analyte are sensitive functions of their molecular dimensions, as well as zeolite pore size and shsqre [110]. 

Due to the large molecular dimensions of proteins, these molecules probably will be unable to interact directly with most silanol groups present on the support. Therefore, one could expect a difference in peak shape and recoveries betweoi peptides and proteins on supports which have a relatively high silanol content, for example, the Cig column produced by Waters Associates for use in their radially compressed analytical system. In fact, we have found that this column can give problems with small basic peptides but is particularly useful for the separation of larger peptides and of proteins (20). 

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