Intramolecular spectroscopy

Murry RL, Fourkas JT, Keyes T. Nonresonant intramolecular spectroscopy beyond the Placzek approximation. I. Third-order spectroscopy. J Chem Phys 1998 109 2814-2825. 

H. N. V. Temperley. Liquid State Physics. In J. van Kranendonk (ed.). Intramolecular Spectroscopy and Dynamical Properties of Dense Systems—Proceedings of the International School of Physics Enrico Fermi," Course LXXV, North-Holland, Amsterdam, 1980, pp. 393-398. 

Callegari A, Rebstein J, Muenter J S, Jost R and Rizzo T R 1999 The spectroscopy and intramolecular vibrational energy redistribution dynamics of HOCI in the u(OH) = 6 region, probed by infrared-visible double resonance overtone excitation J. Chem. Phys. 111 123-33... 

Quack M 1992 Time dependent intramolecular quantum dynamics from high resolution spectroscopy and laser chemistry Time Dependent Quantum Molecular Dynamics Experiment and Theory. Proc. NATO ARW 019/92 (NATO ASI Ser. Vol 299) ed J Broeckhove and L Lathouwers (New York Plenum) pp 293-310... 

Boyarkin O V and Rizzo T R 1996 Secondary time scales of intramolecular vibrational energy redistribution in CFgH studied by vibrational overtone spectroscopy J. Chem. Phys. 105 6285-92... 

Vibrational spectroscopy has been, and will continue to be, one of the most important teclmiques in physical chemistry. In fact, the vibrational absorption of a single acetylene molecule on a Cu(lOO) surface was recently reported [ ]. Its endurance is due to the fact that it provides detailed infonnation on structure, dynamics and enviromnent. It is employed in a wide variety of circumstances, from routine analytical applications, to identifying novel (often transient) species, to providing some of the most important data for advancing the understanding of intramolecular and intemiolecular interactions. 

So far we have exclusively discussed time-resolved absorption spectroscopy with visible femtosecond pulses. It has become recently feasible to perfomi time-resolved spectroscopy with femtosecond IR pulses. Flochstrasser and co-workers [M, 150. 151. 152. 153. 154. 155. 156 and 157] have worked out methods to employ IR pulses to monitor chemical reactions following electronic excitation by visible pump pulses these methods were applied in work on the light-initiated charge-transfer reactions that occur in the photosynthetic reaction centre [156. 157] and on the excited-state isomerization of tlie retinal pigment in bacteriorhodopsin [155]. Walker and co-workers [158] have recently used femtosecond IR spectroscopy to study vibrational dynamics associated with intramolecular charge transfer these studies are complementary to those perfomied by Barbara and co-workers [159. 160], in which ground-state RISRS wavepackets were monitored using a dynamic-absorption technique with visible pulses. 

B2.5.8 INTRAMOLECULAR KINETICS FROM HIGH-RESOLUTION SPECTROSCOPY... 

Molecular spectroscopy offers a fiindamental approach to intramolecular processes [18, 94]. The spectral analysis in temis of detailed quantum mechanical models in principle provides the complete infomiation about the wave-packet dynamics on a level of detail not easily accessible by time-resolved teclmiques. 

Ding C F, Wang X B and Wang L S 1998 Photoelectron spectroscopy of doubly charged anions intramolecular Coulomb repulsion and solvent stabilization J. Phys. Chem. A 102 8633... 

In order to define how the nuclei move as a reaction progresses from reactants to transition structure to products, one must choose a definition of how a reaction occurs. There are two such definitions in common use. One definition is the minimum energy path (MEP), which defines a reaction coordinate in which the absolute minimum amount of energy is necessary to reach each point on the coordinate. A second definition is a dynamical description of how molecules undergo intramolecular vibrational redistribution until the vibrational motion occurs in a direction that leads to a reaction. The MEP definition is an intuitive description of the reaction steps. The dynamical description more closely describes the true behavior molecules as seen with femtosecond spectroscopy. 

Specific optical rotation values, [a], for starch pastes range from 180 to 220° (5), but for pure amylose and amylopectin fractions [a] is 200°. The stmcture of amylose has been estabUshed by use of x-ray diffraction and infrared spectroscopy (23). The latter analysis shows that the proposed stmcture (23) is consistent with the proposed ground-state conformation of the monomer D-glucopyranosyl units. Intramolecular bonding in amylose has also been investigated with nuclear magnetic resonance (nmr) spectroscopy (24). 

Benzo[b]thiophene-2,3-quinone, 5-chloro-oxidation, 4, 824 Benzothiophenes, 4, 863-934 biological activity, 4, 911-913 intramolecular acylation, 4, 761 mass spectrometry, 4, 739 metabolism, 1, 242 phosphorescence, 4, 16 reactivity, 4, 741-861 spectroscopy, 4, 713-740 structure, 4, 713-740 substituents reactivity, 4, 796-839... 

The thirty-two silent modes of Coo have been studied by various techniques [7], the most fruitful being higher-order Raman and infra-red spectroscopy. Because of the molecular nature of solid Cqq, the higher-order spectra are relatively sharp. Thus overtone and combination modes can be resolved, and with the help of a force constant model for the vibrational modes, various observed molecular frequencies can be identified with specific vibrational modes. Using this strategy, the 32 silent intramolecular modes of Ceo have been determined [101, 102]. 

Either UV-VIS or IR spectroscopy can be combined with the technique of matrix isolation to detect and identify highly unstable intermediates. In this method, the intomediate is trapped in a solid inert matrix, usually one of the inert gases, at very low temperatures. Because each molecule is surrounded by inert gas atoms, there is no possiblity for intermolecular reactions and the rates of intramolecular reactions are slowed by the low temperature. Matrix isolation is a very useful method for characterizing intermediates in photochemical reactions. The method can also be used for gas-phase reactions which can be conducted in such a way that the intermediates can be rapidly condensed into the matrix. 

Compound 233 was prepared from 144 and 234, and its intramolecular ligand reorganization was investigated by variable temperature NMR spectroscopy (80JA5073). 

When a tautomeric equilibrium is possible, neutral dihydro-1,3,5-triazines exist predominantly or exclusively in their 1,2-dihydro forms. Thus, the formation of 1-substituted 1,2-dihydro-l,3,5-triazines 104 was reported on intramolecular cyclization of imidoylcarbodiimides (86CB3737). No corresponding 1,4-dihydro tautomers were observed by H, NMR, or IR spectroscopy in solution. 

The first Raman and infrared studies on orthorhombic sulfur date back to the 1930s. The older literature has been reviewed before [78, 92-94]. Only after the normal coordinate treatment of the Sg molecule by Scott et al. [78] was it possible to improve the earlier assignments, especially of the lattice vibrations and crystal components of the intramolecular vibrations. In addition, two technical achievements stimulated the efforts in vibrational spectroscopy since late 1960s the invention of the laser as an intense monochromatic light source for Raman spectroscopy and the development of Fourier transform interferometry in infrared spectroscopy. Both techniques allowed to record vibrational spectra of higher resolution and to detect bands of lower intensity. 

Table 10.4 lists the rate parameters for the elementary steps of the CO + NO reaction in the limit of zero coverage. Parameters such as those listed in Tab. 10.4 form the highly desirable input for modeling overall reaction mechanisms. In addition, elementary rate parameters can be compared to calculations on the basis of the theories outlined in Chapters 3 and 6. In this way the kinetic parameters of elementary reaction steps provide, through spectroscopy and computational chemistry, a link between the intramolecular properties of adsorbed reactants and their reactivity Statistical thermodynamics furnishes the theoretical framework to describe how equilibrium constants and reaction rate constants depend on the partition functions of vibration and rotation. Thus, spectroscopy studies of adsorbed reactants and intermediates provide the input for computing equilibrium constants, while calculations on the transition states of reaction pathways, starting from structurally, electronically and vibrationally well-characterized ground states, enable the prediction of kinetic parameters. 

Keepers, J.W. and James, T.L., A theoretical smdy of distance determinations from NMR two-dimensional nuclear Overhauser effect spectra, J. Mag. Resort, 57, 404, 1984. Kemp, W., Organic Spectroscopy, 3rd ed., W.H. Ereeman, New York, 1991. Figueiredo, P. et al., New aspects of anthocyanin complexation intramolecular copigmentation as a means for colour loss Phytochemistry, 41, 301, 1996. 

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