F-actin structure

Cytochalasins B and D are used as tools to study F-actin. Cytochalasins bind to the barbed end of F-actin and block the addition as well as dissociation of G-actin at that end. When applied to cultured cells micromolar concentrations of cytochalasins remove stress fibres and other F-actin structures. 

The cy tochalasins A, B, C, D, E, and H are found in various species of mould. Mainly cytochalasin B and D are used as experimental tools. Cytochalasin D is 10 times more potent, acting at concentrations between 2 and 35 nM in cell-free systems. Cy tochalasins bind to the barbed end of F-actin and block the addition as well as dissociation of G-actin at that end. At micromolar concentrations, cytochalasin D can bind to G-actin and actin dimers and thus block additional polymerization. When applied to cultured cells, micromolar concentrations of cytochalasins remove stress fibres and other F-actin structures. 

F-actin structure 338 thin filaments 369 Actinidin 618 a-Actinin 370,405 Actinomycetes 6 Activation... 

Following their refinement of the F-actin structure, ben-Avraham and Tirion carried out gas phase normal mode analyses of their model of the F-actin polymer as well as models developed by others. These calculations assumed rigid and equivalent monomers with six external degrees of freedom. The monomers interact through a harmonic potential... 

The F-actin helix has 13 molecules of G-actin in six turns of the helix, repeating every 360 A. Oriented gels of actin fibers yield x-ray fiber diffraction patterns to about 6 A resolution. Knowing the atomic structure of G-actin it was possible for the group of Ken Holmes to determine its orientation in the F-actin fiber, and thus arrive at an atomic model of the actin filament that best accounted for the fiber diffraction pattern. 

The diversity of these subcellular actin structures is remarkable and appears to be determined by the interactions of many actin-binding proteins (ABPs) as well as by changes in the concentrations of intracellular signaling molecules such as Ca and cAMP, by small GTP-binding proteins, and by signals arising from mechanical stress. Approximately 50% of the actin molecules in most animal cells are unpolymerized subunits in the cytosolic pool and exist in a state of dynamic equilibrium with labile F-actin filamentous structures (i.e., new structures are formed while existing structures are renewed) (Hall, 1994). 

Probing the Intermediate ADP-P State on F-Actin Using Structural Analogues of P, AIF4 and BeFi, H2O 47... 

The myosin head has long been shown to induce, even in low ionic strength buffers, polymerization of G-actin into decorated F-actin-S i filaments that exhibit the classical arrowhead structure (Miller et al., 1988 and older references therein). However, to date, the molecular mechanism of this polymerization process remains unknown. 

Combeau, C. Carlier, M.-F. (1988). Probing the mechanism of ATP hydrolysis on F-actin using vaitadate and the structural analogs of phosphate BeF j and AIF J. J. Biol. Chem. 263,17429-17434. 

Milligan, R.A., Whittaker, M., Safer, D. (1990). Molecular structure of F-actin and location of surface binding sites. Nature 248,217-221. 

Orlova, A. Egelman, E.H. (1992). Structural basis for the destabilization of F-actin by phosphate release following ATP hydrolysis. J. Mol. Biol. 227, 1043-1048. 

Monomeric G-actin (43 kDa G, globular) makes up 25% of muscle protein by weight. At physiologic ionic strength and in the presence of Mg, G-actin polymerizes noncovalently to form an insoluble double helical filament called F-actin (Figure 49-3). The F-actin fiber is 6-7 nm thick and has a pitch or repeating structure every 35.5 nm. 

In striated muscle, there are two other proteins that are minor in terms of their mass but important in terms of their function. Tropomyosin is a fibrous molecule that consists of two chains, alpha and beta, that attach to F-actin in the groove between its filaments (Figure 49-3). Tropomyosin is present in all muscular and muscle-fike structures. The troponin complex is unique to striated muscle and consists of three polypeptides. Troponin T (TpT) binds to tropomyosin as well as to the other two troponin components. Troponin I (Tpl) inhibits the F-actin-myosin interaction and also binds to the other components of troponin. Troponin C (TpC) is a calcium-binding polypeptide that is structurally and functionally analogous to calmodulin, an important calcium-binding protein widely distributed in nature. Four molecules of calcium ion are bound per molecule of troponin C or calmodulin, and both molecules have a molecular mass of 17 kDa. 

Two of the cytoskeletal components, the actin filaments and the microtubules have been studied with molecular rotors. The main component of the actin filaments is the actin protein, a 44 kD molecule found in two forms within the cell the monomeric globulin form (G-actin) and the filament form (F-actin). Actin binds with ATP to form the microfilaments that are responsible for cell shape and motility. The rate of polymerization from the monomeric form plays a vital role in cell movement and signaling. Actin filaments form the cortical mesh that is the basis of the cytoskeleton. The cytoskeleton has an active relationship with the plasma membrane. Functional proteins found in both structures... 

A basic structural property of protein filaments is polarity, that is, directionality. Almost all naturally occurring filaments are polar (e.g., F-actin, microtubules, TMV, and so on). The few exceptions are either bipolar, like myosin (Huxley, 1963 Squire, 1981), or nonpolar, like intermediate filaments (Herrmann and Aebi, 2004). One method of determining... 

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