Denaturant, definition

For biochemical reactions in which hydrogen ions (H ) are consumed or produced, the usual definition of the standard state is awkward. Standard state for the ion is 1 M, which corresponds to pH 0. At this pH, nearly all enzymes would be denatured, and biological reactions could not occur. It makes more sense to use free energies and equilibrium constants determined at pH 7. Biochemists have thus adopted a modified standard state, designated with prime ( ) symbols, as in AG°, AH°, and so on. For values determined... 

Water soluble protein with a relative molecular mass of ca. 32600, which particularly contains copper and zinc bound like chelate (ca. 4 gram atoms) and has superoxide-dismutase-activity. It is isolated from bovine liver or from hemolyzed, plasma free erythrocytes obtained from bovine blood. Purification by manyfold fractionated precipitation and solvolyse methods and definitive separation of the residual foreign proteins by denaturizing heating of the orgotein concentrate in buffer solution to ca. 65-70 C and gel filtration and/or dialysis. 

These results strongly suggest that unstructured peptides have definite backbone conformations and that the concept of a denatured protein as a structureless random chain breaks down when backbone conformations of individual residues are described, although the random chain concept may still be useful when describing the overall chain conformation. 

T4 lysozyme 33,497 helix stability of 528, 529 hydrophobic core stability of 533, 544 Tanford j8 value 544, 555, 578, 582-Temperature jump 137, 138, 541 protein folding 593 Terminal transferase 408,410 Ternary complex 120 Tertiary structure 22 Theorell-Chance mechanism 120 Thermodynamic cycles 125-131 acid denaturation 516,517 alchemical steps 129 double mutant cycles 129-131, 594 mutant cycles 129 specificity 381, 383 Thermolysin 22, 30,483-486 Thiamine pyrophosphate 62, 83 - 84 Thionesters 478 Thiol proteases 473,482 TNfn3 domain O-value analysis 594 folding kinetics 552 Torsion angle 16-18 Tbs-L-phenylalanine chloromethyl ketone (TPCK) 278, 475 Transaldolase 79 Tyransducin-o 315-317 Transit time 123-125 Transition state 47-49 definition 55... 

At this temperature, the entropy change for dissolution of liquid hydrocarbons in water is zero. However, the entropy of protein denaturation is far from zero at this temperature but amounts to 17.6 J - K l per mole of amino acid residues (Privalov, 1979), a value that corresponds to an 8-fold increase of the number of possible configurations and is close to the value expected for the helix-coil transition of polypeptides (Schellman, 1955). This difference shows that an oil drop is an inadequate model for a globular protein. A more suitable model resembles that of a small crystal with a quite definite positive melting entropy (see also Bellow, 1977, 1978). 

The definition of a more efficient enzymatic system could be based on the separation of the catalytic cycle of the enzyme and the degradation step by the Mn3+ reactive species in MnP systems. The Mn3+-chelates present several advantages in their use as oxidants. They are more tolerant to protein denaturing conditions such as extremes of temperature, pH, oxidants, organic solvents, detergents, and proteases, and they are smaller than proteins therefore, they can penetrate microporous barriers inaccessible to proteins. The optimization of the production of the Mn3+-chelate will have to be compatible with the minimal consumption and deactivation of the enzyme. 

The first reaction to be discussed is denaturation. Denaturation is involved in most structure forming processes although gels may form from already denatured proteins. It is important to control the denaturation process in order to obtain structures with the desired textural properties. Unfortunately most studies on protein denaturation have been made by biochemists mainly interested in the native structure. One definition given... 

Solubility. The results from the solubility experiments are given in Figures 4 and 5. The broken curve is the solubility curve for the original soy protein isolate (Purina 500 E) the nitrogen solubility of this product at neutral pH is below 40%, which indicates that the isolate has been partly denatured during its processing. The sample denoted as DH = 1.0% is the control and it is clearly demonstrated that the acid treatment has caused further aggregation and denaturation. The definitely positive DH-value... 

Coacervate drops may be converted into a layer or a flocculent precipitate on standing, but they may be reconverted into drops and solutions. This reversibility may have definite limits, because it is related to the conditions under which the coacervate was formed and its chemical composition. For instance, if the composition of a coacervate includes serum albumin, the number of conversions is usually limited to three or four, after which it is irreversibly denatured. 

The complexity of the SC membrane hinders such definitive interpretation, but, nevertheless, alterations in endotherms can be used to screen molecules suspected of altering membrane function. Conversely, one should note that the absence of additive-induced alterations in the phase transition profile does not rale out their perturbing effect, but rather indicates that the additive does not modify the gel phase. As described earlier, a DSC thermogram of hydrated but untreated human SC yields four endotherms, the first three of which can be identified as noncooperative lipid-associated phase transitions, while the high-temperature endotheim is attributed to keratin denaturation [33,37]. 

It seems definite that denaturation of proteins and nucleic acids does depend on the m/r molecular H bonds which are partly responsible for the structure. Apparently a critical number of H bonds must be broken before the irreversible denaturation occurs. Cox and Peacocke (455) present a simplified mathematical attack on denaturation which may have promise. They use a statistical method of finding the number of... 

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