Dehydrogenases hydrogenation

GLYOXYLATE REDUCTASE HISTIDINOL DEHYDROGENASE HOMOISOCITRATE DEHYDROGENASE HOMOSERINE DEHYDROGENASE HYDROGEN DEHYDROGENASE... 

In analogy to the NAD(P) -dependent dehydrogenases, hydrogen transfer can take place to either the re or the si face of the isoalloxazine ring system ... 

Oxidoreduciases. Enzymes catalysing redox reactions. The substrate which is oxidized is regarded as the hydrogen donor. This group includes the trivially named enzymes, dehydrogenases, oxidases, reductases, peroxidases, hydrogenases and hydroxylases. 

Iron Sulfur Compounds. Many molecular compounds (18—20) are known in which iron is tetrahedraHy coordinated by a combination of thiolate and sulfide donors. Of the 10 or more stmcturaHy characterized classes of Fe—S compounds, the four shown in Figure 1 are known to occur in proteins. The mononuclear iron site REPLACE occurs in the one-iron bacterial electron-transfer protein mbredoxin. The [2Fe—2S] (10) and [4Fe—4S] (12) cubane stmctures are found in the 2-, 4-, and 8-iron ferredoxins, which are also electron-transfer proteins. The [3Fe—4S] voided cubane stmcture (11) has been found in some ferredoxins and in the inactive form of aconitase, the enzyme which catalyzes the stereospecific hydration—rehydration of citrate to isocitrate in the Krebs cycle. In addition, enzymes are known that contain either other types of iron sulfur clusters or iron sulfur clusters that include other metals. Examples include nitrogenase, which reduces N2 to NH at a MoFe Sg homocitrate cluster carbon monoxide dehydrogenase, which assembles acetyl-coenzyme A (acetyl-CoA) at a FeNiS site and hydrogenases, which catalyze the reversible reduction of protons to hydrogen gas. 

Fe= Catalase Flavin adenine dinucleotide (FAD) Hydrogen atoms Succinate dehydrogenase... 

The enzyme succinate dehydrogenase (SDH) is competitively inhibited by malo-nate. Figure 14.14 shows the structures of succinate and malonate. The structural similarity between them is obvious and is the basis of malonate s ability to mimic succinate and bind at the active site of SDH. However, unlike succinate, which is oxidized by SDH to form fumarate, malonate cannot lose two hydrogens consequently, it is unreactive. 

FIGURE 18.10 Hydrogen and electrons released in the course of oxidative catabolism are transferred as hydride ions to the pyridine nucleotide, NAD, to form NADH -t- H in dehydrogenase reactions of the type... 

As another example, studies with deuterium-labeled substrates have shown that the reaction of ethanol with the coenzyme NAD+ catalyzed by yeast alcohol dehydrogenase occurs with exclusive removal of the pro-R hydrogen from ethanol and with addition only to the Re face of NAD+. 

Step 1 of Figure 29.3 Introduction of a Double Bond The /3-oxidation pathway begins when a fait)7 acid forms a thioester with coenzyme A to give a fatty acyl Co A. Two hydrogen atoms are then removed from C2 and C3 of the fatty acyl CoA by one of a family of acyl-CoA dehydrogenases to yield an a,/3-unsaturated acyl CoA. This kind of oxidation—the introduction of a conjugated double bond into a carbonyl compound—occurs frequently jn biochemical pathways and usually involves the coenzyme flavin adenine dinucleotide (FAD). Reduced FADH2 is the by-product. 

NAD+ and NADP+ are coenzymes of dehydrogenases. NADH and NADPH are intermediate carriers of both hydrogen and electrons. Most NAD-dependent enzymes are located in the mitochondria and deliver H2 to the respiratory chain whereas NADP-dependent enzymes take part in cytosolic syntheses (reductive biosyntheses). 

Formally, in redox reactions there is transfer of electrons from a donor (the reductant) to the acceptor (the oxidant), forming a redox couple or pair. Oxidations in biological systems are often reactions in which hydrogen is removed from a compound or in which oxygen is added to a compound. An example is the oxidation of ethanol to acetaldehyde and then to acetic acid where the oxidant is NAD. catalyzed by alcohol dehydrogenase and acetaldehyde dehydrogenase, respectively. 

Alcohols such as ethanol, 2-propanol, and so on, have been widely used to recycle the coenzyme for the reduction catalyzed by alcohol dehydrogenase since the enzyme catalyzes both reduction and oxidation. Usually, an excess amount of the hydrogen source is used to push the equilibrium toward formation of product alcohols. 

Figure 8.2 Reduction of ketone with alcohol dehydrogenase from Thermoanaerobacter brockii using glucose-6-sulfate as a hydrogen source [3],...

A ruthenium complex [RuCl2(TPPTS)2]2 was used for regeneration of NADP+ to NADPH withhydrogen. Thus, 2-heptanonewas reduced with alcohol dehydrogenase from Thermoanaerobacter brockii in the presence of the mthenium complex, NAD P, and hydrogen at 60°C to (S)-2-heptanol in 40 % ee. Turnover number was reported to be 18 (Figure 8.6) [5cj. 

Figure 8.6 Reduction of ketone with ruthenium complex and alcohol dehydrogenase using molecular hydrogen as a hydrogen source [5c],...

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