Cysteine hydrolyzing

Figure 20.3. HPLC-ICP-MS separation of 6 M HCl-0.05% m/v cysteine hydrolyzed selenoamino acid standards and Mugil cephalus muscle tissue, (a) Cation exchange of hydrolyzed selenomethionine and muscle tissue, Supelcosil LC-SCX cation exchange column, 20 mM pyridine-formic acid, 1.5 ml min-1, 40°C, pH 2.5. (b) Anion exchange of hydrolyzed selenocystine and muscle tissue. Chromatography conditions as in Figure 20.1.

There are several naturally occurring variations on the lactam-thiazolidine or lactam-dihydrothiazine structures, leading to other useful antibiotics or to inhibitors of the (5-lactamases, enzymes that hydrolyze the (5-lactam unit. One group, termed carbapenems 5 has a five-membered ring in which the thiazolidine sulfur is replaced with CH2- Such compounds may still contain sulfur in a thioethylamine side chain (derived from L-cysteine) as in thienamycin 6, originally isolated from Streptomyces cattleya (Scheme 2). 

The NC-IUBMB has introduced a number of changes in the terminology following the proposals made by Barrett, Rawlings and co-workers [7] [8]. The term peptidase should now be used as a synonym for peptide hydrolase and includes all enzymes that hydrolyze peptide bonds. Previously the term peptidases was restricted to exopeptidases . The terms peptidase and protease are now synonymous. For consistency with this nomenclature, the term proteinases has been replaced by endopeptidases . To complete this note on terminology, we remind the reader that the terms cysteine endopeptidases and aspartic endopeptidases were previously called thiol proteinases and acid or carboxyl proteinases , respectively [9],... 

The mechanism by which A-esterases hydrolyze organophosphates is not completely understood. Involvement of a phosphorylated active-site cysteine and displacement of an activated H20 molecule are two possible hypotheses (see Sect. 3.7.1) [56], A-Esterases comprise enzymes that hydrolyze aryl esters, paraoxon (2.2) and related organophosphate pesticides, and diisopropyl-fluorophosphate (DFP, diisopropyl phosphorofluoridate, 2.3) and related compounds, including nerve gases. These enzymes are found in the current nomenclature listed under arylesterases, aryldialkylphosphatase, and diisop-ropyl-fluorophosphatase. 

Proteins can undergo different rounds of palmitoylation and depalmitoylation, either constitutively or as a response to signals." " Here the Ras proteins are the most commonly discussed examples. As described above, all Ras proteins are expressed with the CAAX-box and are subject to post-translational modifications. First, they get farnesylated and after proteolysis and methylation of the C-terminus, H-/N-Ras as well as K-Ras 4A get further palmitoylated at additional cysteines present in their C-terminus. Palmitoylation occurs in the Golgi apparatus and via vesicular transport the farnesylated and palmitoylated proteins are directed to the plasma membrane (PM). The palmitoyl thioester is hydrolyzed at multiple cellular sites and the protein is transported back to the Golgi via a nonvesicular pathway (Scheme 3)." ... 

The proteolytic enzymes are classified into endopeptidases and exopeptidases, according to their site of attack in the substrate molecule. The endopeptidases or proteinases cleave peptide bonds inside peptide chains. They recognize and bind to short sections of the substrate s sequence, and then hydrolyze bonds between particular amino acid residues in a relatively specific way (see p. 94). The proteinases are classified according to their reaction mechanism. In serine proteinases, for example (see C), a serine residue in the enzyme is important for catalysis, while in cysteine proteinases, it is a cysteine residue, and so on. 

One or two hexachlorobutadiene metabolites appear to cause some of the compound-induced renal damage (see Section 2.3.5) and are more toxic than the parent compound, causing comparable lesions in the kidneys at lower doses. These active thioacylating metabolites are capable of modifying DNA, as indicated by the isolation of sulfur-containing nucleides from hydrolyzed DNA from renal cells exposed to the hexachlorobutadiene cysteine derivative (Vamvakas et al. 1988b). 

An excellent review on protein hydrolysis for amino acid composition analysis has been published by Eountoulakis and Lahm [190], Hydrolysis can be performed by either chemical (under either acidic or basic conditions) or enzymatic means. The acidic hydrolysis itself can be carried out in a liquid or a gas-phase mode. The conventional acid hydrolysis uses 6M HCl for 20-24 h at 110°C under vacuum [200], In these conditions, asparagine and glutamine are completely hydrolyzed to aspartic acid and glutamic acid, respectively. Tryptophan is completely destroyed (particularly in the presence of high concentrations of carbohydrate), while cysteine and sometimes methionine are partially oxidized. Tyrosine, serine, and threonine are partially destroyed or hydrolyzed and correction factors have to be applied for precise quantification [190,201],... 

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