Schiff base catalysis

Stabilization of enolate anions generated from abstraction of a proton a to a carboxylate Hydrolysis, phosphoryl group transfer via hydrolytic nucleophilic substitution Stabilization of diverse oxyanion intermediates via metal-assisted catalysis Schiff base dependent formation of an electron sink ... 

Fourier transform technique Lewis acid catalysis Schiff base measurement... 

Schiff base fonnation, photochemistry, protein partitioning, catalysis by chymotrypsin, lipase, peroxidase, phosphatase, catalase and alcohol dehydrogenase. 

Compounds containing carbon-nitrogen double bonds can be hydrolyzed to the corresponding aldehydes or ketones. For imines (W = R or H) the hydrolysis is easy and can be carried out with water. When W = H, the imine is seldom stable enough for isolation, and hydrolysis usually occurs in situ, without isolation. The hydrolysis of Schiff bases (W = Ar) is more difficult and requires acid or basic catalysis. Oximes (W = OH), arylhydrazones (W = NHAr), and, most easily, semicarbazones (W = NHCONH2) can also be hydrolyzed. Often a reactive aldehyde (e.g., formaldehyde) is added to combine with the liberated amine. 

Lipid hydroperoxides are either formed in an autocatalytic process initiated by hydroxyl radicals or they are formed photochemically. Lipid hydroperoxides, known as the primary lipid oxidation products, are tasteless and odourless, but may be cleaved into the so-called secondary lipid oxidation products by heat or by metal ion catalysis. This transformation of hydroperoxides to secondary lipid oxidation products can thus be seen during chill storage of pork (Nielsen et al, 1997). The secondary lipid oxidation products, like hexanal from linoleic acid, are volatile and provide precooked meats, dried milk products and used frying oil with characteristic off-flavours (Shahidi and Pegg, 1994). They may further react with proteins forming fluorescent protein derivatives derived from initially formed Schiff bases (Tappel, 1956). 

The Klotz group has also found rate enhancements of decarboxylation reactions with PEI derivatives. Catalysis of decarboxylation of j -keto acids by small amines goes via a Schiff base intermediate. Mine s group has shown that unmodified PEI catalyzes dedeuteration effectively and that the reactions involve Schiff base intermediates 34, and references therein). Dodecyl-PEI containing free amino groups and quaternized nitrogens, dodecyl-PEI-Q-NHj, was found to be an effective catalyst for the decomposition of oxaloacetate (reaction 12) (92). At pH 4.5 the polymer is 10 times as effective as ethylamine. was found to be 3.5 x 10 " M at pH 4.5. 

Scheme 2.55 The combinatorial preparation of schiff bases as ligands for asymmetric catalysis.

Lactobacillus delbrueckii. In 1953, Rodwell suggested that the histidine decarboxylase of Lactobacillus 30a was not dependent upon pyridoxal phosphate (11). Rodwell based his suggestion upon the fact that the organism lost its ability to decarboxylate ornithine but retained high histidine decarboxylase activity when grown in media deficient in pyridoxine. It was not until 1965 that E. E. Snell and coworkers (12) isolated the enzyme and showed that it was, indeed, free of pyridoxal phosphate. Further advances in characterization of the enzyme were made by Riley and Snell (13) and Recsei and Snell (14) who demonstrated the existence of a pyruvoyl residue and the participation of the pyruvoyl residue in histidine catalysis by forming a Schiff base intermediate in a manner similar to pyridoxal phosphate dependent enzymes. Recent studies by Hackert et al. (15) established the subunit structure of the enzyme which is similar to the subunit structure of a pyruvoyl decarboxylase of a Micrococcus species (16). 

Schiff bases of 3-aminocarbazole were reported to react with ketones using mineral acid catalysis, through cyclization at C-2 giving 154 ° or at C-4 giving 155 (R = Me or Ar). ° ... 

Alkylation of Schiff bases, derived from amino acid and non-optically active aromatic aldehydes by phase-transfer catalysis in the presence of cinchona alkaloid derived quaternary ammonium salts, gave ce values of up to 50% l42. 

In the catalysis of the lyase from C. perfringens, the participation of lysine residues forming intennediary Schiff bases between enzyme and substrate molecules, and of histidine residues, has been demonstrated with the aid of photooxidation, reagents for histidine modification, and borohydride reduction in the presence of substrate.408-418 Thus, according to Frazi and coworkers,414 the lyase belongs to the class I lyases (aldolases). The catalytic mechanism proposed is outlined in Scheme 3. Evidence has been educed for the existence of a similar mechanism of cleavage of sialic acid by the lyase enriched from pig kidney.411... 

In enzymic decarboxylations the mechanistic pathway seems to involve Schiff base formation between an —NH2 from a lysine residue and a C=0 of the keto acid.52 Likewise, with small-molecule primary amines, catalysis of decarboxylation of /3-ketoacids53-58 has been ascribed to a Schiff base intermediate. The overall reaction for oxalacetate is... 

The peculiar metal ion specificity of the ATP cleavage reaction may perhaps be explained by reference to some studies on the metal complexes of Schiff bases, which have provided clues to many aspects of biological metal catalysis. It was shown that metal ions will split the carbon-nitrogen double bond in thiophenalde-hyde-ethylenediamine (18, 21) as a consequence of the electronic-drift-to-metal... 

These examples illustrate that biomolecules may act as catalysts in soils to alter the structure of organic contaminants. The exact nature of the reaction may be modified by interaction of the biocatalyst with soil colloids. It is also possible that the catalytic reaction requires a specific mineral-biomolecule combination. Mortland (1984) demonstrated that py ridoxal-5 -phosphate (PLP) catalyzes glutamic acid deamination at 20 °C in the presence of copper-substituted smectite. The proposed pathway for deamination involved formation ofa Schiff base between PLP and glutamic acid, followed by complexation with Cu2+ on the clay surface. Substituted Cu2+ stabilized the Schiff base by chelation of the carboxylate, imine nitrogen, and the phenolic oxygen. In this case, catalysis required combination of the biomolecule with a specific metal-substituted clay. 

Decarboxylation of p-oxoacids. Beta-oxoacids such as oxaloacetic acid and acetoacetic acid are unstable, their decarboxylation being catalyzed by amines, metal ions, and other substances. Catalysis by amines depends upon Schiff base formation,232 while metal ions form chelates in which the metal assists in electron withdrawal to form an enolate anion.233 235... 

Nucleophilic catalysis is a specific example of covalent catalysis the substrate is transiently modified by formation of a covalent bond with the catalyst to give a reactive intermediate. There are also many examples of electrophilic catalysis by covalent modification. It will be seen later that in the reactions of pyridoxal phosphate, Schiff base formation, and thiamine pyrophosphate, electrons are stabilized by delocalization. 

Effective concentration 65-72 entropy and 68-72 in general-acid-base catalysis 66 in nucleophilic catalysis 66 Elastase 26-30, 40 acylenzyme 27, 40 binding energies of subsites 356, 357 binding site 26-30 kinetic constants for peptide hydrolysis 357 specificity 27 Electrophiles 276 Electrophilic catalysis 61 metal ions 74-77 pyridoxal phosphate 79-82 Schiff bases 77-82 thiamine pyrophosphate 82-84 Electrostatic catalysis 61, 73, 74,498 Electrostatic effects on enzyme-substrate association rates 159-161... 

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