Born-Oppenheimer approximation motion

The first requirement is the definition of a low-dimensional space of reaction coordinates that still captures the essential dynamics of the processes we consider. Motions in the perpendicular null space should have irrelevant detail and equilibrate fast, preferably on a time scale that is separated from the time scale of the essential motions. Motions in the two spaces are separated much like is done in the Born-Oppenheimer approximation. The average influence of the fast motions on the essential degrees of freedom must be taken into account this concerns (i) correlations with positions expressed in a potential of mean force, (ii) correlations with velocities expressed in frictional terms, and iit) an uncorrelated remainder that can be modeled by stochastic terms. Of course, this scheme is the general idea behind the well-known Langevin and Brownian dynamics. 

In currently available software, the Hamiltonian above is nearly never used. The problem can be simplified by separating the nuclear and electron motions. This is called the Born-Oppenheimer approximation. The Hamiltonian for a molecule with stationary nuclei is... 

The total energy in an Molecular Orbital calculation is the net result of electronic kinetic energies and the interactions between all electrons and atomic cores in the system. This is the potential energy for nuclear motion in the Born-Oppenheimer approximation (see page 32). 

Since nuclei are much heavier than electrons and move slower, the Born-Oppenheimer Approximation suggests that nuclei are stationary and thus that we can solve for the motion of electrons only. This leads to the concept of an electronic Hamiltonian, describing the motion of electrons in the potential of fixed nuclei. 

The Born-Oppenheimer approximation is the first of several approximations used to simplify the solution of the Schradinger equation. It simplifies the general molecular problem by separating nuclear and electronic motions. This approximation is reasonable since the mass of a typical nucleus is thousands of times greater than that of an electron. The nuclei move very slowly with respect to the electrons, and the electrons react essentially instantaneously to changes in nuclear position. Thus, the electron distribution within a molecular system depends on the positions of the nuclei, and not on their velocities. Put another way, the nuclei look fixed to the electrons, and electronic motion can be described as occurring in a field of fixed nuclei. 

Use of the Born-Oppenheimer approximation is implicit for any many-body problem involving electrons and nuclei as it allows us to separate electronic and nuclear coordinates in many-body wave function. Because of the large difference between electronic and ionic masses, the nuclei can be treated as an adiabatic background for instantaneous motion of electrons. So with this adiabatic approximation the many-body problem is reduced to the solution of the dynamics of the electrons in some frozen-in configuration of the nuclei. However, the total energy calculations are still impossible without making further simplifications and approximations. 

The separation of the electronic and nuclear motions depends on the large difference between the mass of an electron and the mass of a nucleus. As the nuclei are much heavier, by a factor of at least 1800, they move much more slowly. Thus, to a good approximation the movement of the elections in a polyatomic molecule can be assumed to take place in the environment of the nuclei that are fixed in a particular configuration. This argument is the physical basis of the Born-Oppenheimer approximation. 

First, we shall consider the model where the intermolecular vibrations A—B and intramolecular vibrations of the proton in the molecules AHZ,+1 and BHZ2+1 may be described in the harmonic approximation.48 In this case, using the Born-Oppenheimer approximation to separate the motion of the proton from the motion of the other atoms for the symmetric transition, Eq. (16) may be... 

Marcus uses the Born-Oppenheimer approximation to separate electronic and nuclear motions, the only exception being at S in the case of nonadiabatic reactions. Classical equilibrium statistical mechanics is used to calculate the probability of arriving at the activated complex only vibrational quantum effects are treated approximately. The result is... 

Separation of the wave functions describing the motion of nuclei and the wave function describing the electrons (Born-Oppenheimer approximation). This approximation is based on the fact that the nuclear particles are much heavier than the ele ctrons, and therefore much slower than the latter. In such a situation, the electronic wave function can be found at fixed positions of the nuclei. 

In the Born-Oppenheimer approximation, the total wavefunction of a molecule is approximated as a product of parts which describe the translational motion, the rotational motion, the vibrational motion, the electronic motion, etc. According to the (approximate) Franck-Condon... 

The purpose of most quantum chemical methods is to solve the time-independent Schrodinger equation. Given that the nuclei are much more heavier than the electrons, the nuclear and electronic motions can generally be treated separately (Born-Oppenheimer approximation). Within this approximation, one has to solve the electronic Schrodinger equation. Because of the presence of electron repulsion terms, this equation cannot be solved exactly for molecules with more than one electron. 

One branch of chemistry where the use of quantum mechanics is an absolute necessity is molecular spectroscopy. The topic is interaction between electromagnetic waves and molecular matter. The major assumption is that nuclear and electronic motion can effectively be separated according to the Born-Oppenheimer approximation, to be studied in more detail later on. The type of interaction depends on the wavelength, or frequency of the radiation which is commonly used to identify characteristic regions in the total spectrum, ranging from radio waves to 7-rays. 

To be specific we consider electron transfer from a reactant in a solution, such as [Fe(H20)6]2+, to an acceptor, which may be a metal or semiconductor electrode, or another molecule. To obtain wavefunc-tions for the reactant in its reduced and oxidized state, we rely on the Born-Oppenheimer approximation, which is commonly used for the calculation of molecular properties. This approximation is based on the fact that the masses of the nuclei in a molecule are much larger than the electronic mass. Hence the motion of the nuclei is slow, while the electrons are fast and follow the nuclei almost instantaneously. The mathematical consequences will be described in the following. 

The motion of the electrons is so much faster than the motion of the atomic nuclei that, in practice, we can make an important approximation we say the nuclei are stationary during the electronic excitation. This idea is known as the Born-Oppenheimer approximation. 

Hence, according to the symmetry selection rule, n —> n transitions are allowed but n —> ti transitions are forbidden. However, in practice the n —> it transition is weakly allowed due to coupling of vibrational and electronic motions in the molecule (vibronic coupling). Vibronic coupling is a result of the breakdown of the Born-Oppenheimer approximation. 

According to the Born-Oppenheimer approximation, the motions of electrons are much more rapid than those of the nuclei (i.e. the molecular vibrations). Promotion of an electron to an antibonding molecular orbital upon excitation takes about 10-15 s, which is very quick compared to the characteristic time for molecular vi-... 

The assumption of weak electronic coupling may not be valid for vibrational levels near the region where the reactant and product surfaces intersect. If the extent of electronic coupling is sufficient (tens of cm ), the timescale for electron transfer for vibrational levels near the intersectional region will approach the vibrational timescale, electronic and nuclear motions are coupled, and the Born-Oppenheimer approximation is no longer valid. 

The important fact that must be remembered is that in the Born-Oppenheimer approximation, Equation 2.8, the potential energy for vibrational motion is Eeiec(S) which is independent of isotopic mass of the atoms. In the adiabatic approximation, the potential energy function is Eeiec(S)+C and this potential will depend on nuclear mass if C depends on nuclear mass. 

It is important to point out here, in an early chapter, that the Born-Oppenheimer approximation leads to several of the major applications of isotope effect theory. For example the measurement of isotope effects on vapor pressures of isotopomers leads to an understanding of the differences in the isotope independent force fields of liquids (or solids) and the corresponding vapor molecules with which they are in equilibrium through use of statistical mechanical theories which involve vibrational motions on isotope independent potential functions. Similarly, when one goes on to the consideration of isotope effects on rate constants, one can obtain information about the isotope independent force constants which characterize the transition state, and how they compare with those of the reactants. 

As already noted, in the Born-Oppenheimer approximation, the nuclear motion of the system is subject to a potential which expresses the isotope independent electronic energy as a function of the distortion of the coordinates from the position of the transition state. An analysis of the motions of the N-atom transition state leads to three translations, three rotations (two for a linear molecule), and 3N - 6 (3N- 5 for a linear transition state) vibrations, one which is an imaginary frequency (e.g. v = 400icm 1 where i = V—T), and the others are real vibrational frequencies. The imaginary frequency corresponds to motion along the so-called reaction... 

---